Salvelinus sp. IW2-2015 (Arctic char): 111970468
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Entry
111970468 CDS
T05762
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111970468
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
111970468
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Atx10homo_assoc
Arm_2
HEAT_2
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
111970468
NCBI-ProteinID:
XP_023852995
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Position
LG1:56173536..56186492
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AA seq
760 aa
AA seq
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MMTMDPLKSAMSIGNVEETSLALPSDNKLRSKQQRVLDQVQTIKRGKSKYSKNGSLSSPT
KSPTSPMYISVFTDSIKSPTSPNGFVFSNGTNGFSRTLSHEQSTKRMVLSSKGSTVQRNM
SSSSQWERRFPLSPPVARGQRNSSRSVPDMDPFPFPTTTQRPAQAPASALQQLQSSVPAR
QLQSNRSSFFLTERGNSQFISNGNAPSQVIVNGNDVQKKHSQLIATRQTKSSGQITSSET
RIERAPSNRSMAEPKISVGKSKIDAGMNDDGQLADITMTEAVQYLSSGDVNYQHYGASFI
QHSTYSEDKAKQEVLRLKGIPPLVNLLKSPSPQVQQTASAALRNLAFKDAGNKEEVQRCG
GITEALALLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGGVDE
TNKNLDPEVFYHATACLRNLSCATQSNRQAMRNCRGLIDSLGSYVQDCVAAERPDDKSVE
NCVCVLHNLSFQLESESPALFSRITALAGTISRANASTETGPIGCFSQQSSKIQEQESHF
DYPVMEEQNPKGAGWLFHSKTMQSYLSLLRSSQREDTLEASCGALQNLTANQGIVSRVMS
QNIVQKLNGLPEISRLLQSPNPSLQKTAVALVSNLAKNQRLQSIMARQTFPDLVGILSSW
TKEGTESDDTLAMACQTSHSLLMKEPELGKRLLSNNLVNSLNDLSKNRLFPKASKAAGVL
LYSLWSEKDIQSFLKKQGMNKGSFVNDITSVAHRSVQVVE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccattgggaatgtggaggagacatct
cttgctttgccgtccgataacaaacttcggtccaaacagcagcgtgtcttggatcaggtg
caaaccattaagaggggcaagtcgaagtacagtaaaaatggatctttatcgtcgccaacg
aaatcgccaacgagtcctatgtacatcagcgtattcactgactccattaagtcacctacc
agtcccaatggatttgtcttctcgaatggtacaaatggcttctctagaacgctcagccat
gagcagagcaccaagcgaatggtactgtcctccaagggatctactgttcagagaaacatg
agcagctccagccaatgggagagacgattccctctcagtccccctgtagccaggggtcag
cgcaacagcagccgcagtgtgcctgatatggaccccttccccttccccaccactacacag
cgccctgcccaggccccggcttcagccctgcagcagttgcagtcctcggtccccgcccgg
cagctccaatccaacagatccagcttcttccttactgagaggggcaacagccagttcatc
tccaatggcaacgccccctctcaggtcattgtcaatggcaacgatgtgcagaaaaagcac
agccagttgattgccacccgtcagacgaaaagcagcggccagattaccagcagcgaaact
cgtattgagagggcaccatcgaaccgctccatggccgagcccaagatatcagtgggcaag
agcaagattgacgcagggatgaatgatgatggccagcttgctgatattaccatgacggag
gcggtgcagtacctgtccagtggagatgtgaactaccagcactatggcgcctcattcatc
caacactctacctactcagaggacaaggccaagcaggaggtgttgcggctcaaagggatc
cctcctctggtgaacctgctgaagagtcccagtccccaggtccaacagacagcctcggcc
gccctgcggaaccttgcctttaaagatgcgggcaacaaggaggaggtccagcgctgtggg
ggcatcactgaggccctagccctgctccgagacacagactctaccgagacacagaaacaa
ctcacaggtctcctttggaacctgtcgtctgcagacagtctgaagccagagcttgtgcgt
agcgctctgcctgttctgactgagactgtggtagtaccttacacaggaggagtagatgag
accaacaagaacctggacccagaggtcttctaccatgctacagcatgtctacgaaatctg
agctgtgcgacgcaaagcaacaggcaggccatgcgtaactgtcgaggcctcatcgactct
ctgggcagttacgtccaggattgtgtagctgcagagaggccagatgacaagtctgtggag
aactgtgtctgtgtcctgcacaacctgagcttccagctggagagtgagtccccggccctg
ttcagccggatcactgccctggccgggaccatcagccgggccaacgcctccactgagacc
ggccccatcggctgtttcagccaacagagcagcaagatccaggagcaggagagtcacttt
gactaccctgtgatggaggagcagaacccgaaaggtgcgggctggctcttccactccaag
accatgcagagttacctgtctctgctgaggtccagccagagagaagacaccctggaggcc
agctgtggagccctgcagaacctcaccgctaaccaaggcattgtttctagagtgatgagc
cagaacattgtccagaagctgaacggcttgcctgaaatctctcgcctgctgcaatctccc
aaccccagtctacagaagactgctgtggctttggtgtcaaacctagccaagaaccaacgc
cttcagagcatcatggcccgacagacgttcccagacctagttggcatcctcagctcatgg
accaaggaagggacagagtctgacgacaccctggccatggcgtgccaaaccagccacagt
cttctgatgaaggagcctgagctggggaagcgcctgctgagcaacaacctggtcaactca
ctcaacgacctgagcaagaacaggcttttcccaaaggcaagcaaagctgcaggtgtgctc
ctctacagcctctggtcagagaaggacatacagagtttcctaaaaaagcaagggatgaat
aagggttcctttgtgaatgacatcaccagcgtggctcacaggtctgtgcaggtcgttgag
taa
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