KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111970514
Entry
111970514         CDS       T05762                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111970514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111970514
   03041 Spliceosome [BR:salp03041]
    111970514
   03032 DNA replication proteins [BR:salp03032]
    111970514
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     111970514
Spliceosome [BR:salp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111970514
  U2 snRNP components
    111970514
 Complex B
  U1 snRNP components
    111970514
  U4/U6.U5 tri-snRNP components
    111970514
 Complex C
  U2 snRNP components
    111970514
DNA replication proteins [BR:salp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111970514
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 111970514
NCBI-ProteinID: XP_023853083
LinkDB
Position
LG11:complement(48930854..48934798)
AA seq 237 aa
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILXDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGATLAGAPTQYPPGRGGPPPMGRGA
PPPGMMGPPPGMRPPMGPPMGMLPGRGGPMGMPPPGMRPPHPGMRGPLPPGMRPPRP
NT seq 714 nt   +upstreamnt  +downstreamnt
atgactgttggaaagagtagtaagatgctgcaacacatcgacttcaggatgcgatgcatc
ctgcaggacggtcgtatcttcatcgggactttcaaagcctttgacaaacacatgaacctc
atcttgtgrgactgcgacgagttcagaaagatcaagcccaagaattccaaacagcctgag
cgtgaagagaagcgggtacttggcctggtgctgctcagaggagagaatctggtctccatg
acagtggaaggaccccctcccaaagatactggcattgcccgtgtgcccctggctggtgtg
gcaggaggcccaggagttggcagggcagctggcagaggcgtccctgccggagcacccatg
ccccaggcacccgcaggcctcgctgggccggtcagaggagtgggaggcccctcgcaacag
gtaatgaccccacagggcaggggaacggtcgctgcagcagcagctggtgccaccctcgct
ggtgcccccacacagtacccaccaggcagaggaggacccccrcccatgggtcgcggtgca
ccccctccaggtatgatgggccctcccccaggcatgaggcctcccatgggtcctccaatg
ggaatgctccctggacgtggaggtccaatgggtatgccccctcccggcatgaggccacca
cacccaggcatgagaggcccactacccccaggaatgcgtccccccagaccttga

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