KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111971338
Entry
111971338         CDS       T05762                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111971338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:salp03000]
    111971338
   04121 Ubiquitin system [BR:salp04121]
    111971338
   03036 Chromosome and associated proteins [BR:salp03036]
    111971338
Enzymes [BR:salp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     111971338
Transcription factors [BR:salp03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    111971338
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     111971338
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    111971338
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111971338
SSDB
Motif
Pfam: PHD_4 zf-CXXC JmjC LRR_4
Other DBs
NCBI-GeneID: 111971338
NCBI-ProteinID: XP_024003157
LinkDB
Position
LG13:50923514..50941856
AA seq 1169 aa
MEXKRRPRFSKRLRSGTRRRYHDDGISDDEIEGKRTFDLEEKLTSERFTSDRVKRMEGKD
LTFEYIQRGGLRDPIIFEKPDGLGIKMPDPDFSVNDVKIFVGSRRMMDVMDVSTQKGIEM
SMAQWRRYYETPPSQRDKLYNVISLEFSHTKLENLVQRPASVDIIDWVDNMWPRHLKERQ
RDSTNSITDMQYPKVQQYCLMSVQGCYTDFHIDFGGSSVWYHILRGGKVFWLIPPTPQNL
ELYEDWVLSGKQGDIFLGDKAQDCQRIDCLIHAVLTLQWTPWCLGNFLHSFNIPMQLNIY
STRGTGHGLTRDPSTCESVNGHTQEEDEEGAPPTQGSKPGVKVHLTPFELEGLWNLLGKL
ESLPSQKNCVPAGIHDAPALLHDIRALLKEHANDIPKLSYTGKPIVKWPKRPSWYQPPPP
PPPVARPKLSATVVPPRPQKPASSMSVLRRRRVRCKRCEACVRTECGDCNFCRDMKKFGG
PGKLKQTCVLRQCLAPGLPLSVVCEICAEGNQEGGEGPVFALTLMECSNCAQIAHPACLK
VTGDGVVNTDLPSCWECPKCVLGITDTESSGTDDDDSGASVGLGAGVSSLSATQGPLGVS
MEPGSAPGLGDEGWGRAILLYPGLVPNPPSWFSEAPLPSPGQLLLEQHGLKRAGRWASGR
RKRVKGDKNKMLHAKRKSSSYLDGRIAKIYRRHSRDDDDSGSDDDDDDEGSRGGGGGAAQ
KMSGPRPRGSGSASRRGYGTGRRGIWRGSSHRGAGRGSGLAPHSSLKMRRGRGGLGAGRG
DREGGRRERGGRVRLRGGTRMQRRRDESEEDDDDDDDDDEEDDDSEEDRQHHHRQRRRRR
RTDDDEEDDDEEDSSARDLEGEDEDVEDEEDDENRSDSEPEPPVLLVSDLNDDLLNGSYL
TVTLQRPPRAKRHPGSIVPKLEAAMSPRTHGGGPGXVQHKTLGKTRHKNGTVATGNGLAQ
PAKNPVGRPPRHRINNPHGDTADRERERDTGLKELMIAGCSWSSMSALSTPSLPCLRTLD
LRWAEGVKDTQIRDLVTPPGCDSRSRLRGCVALRLAGLDISDSTLRLILRHMPLLERLDL
AHCRDLTDQSVCLLTAAGTRNTLTEINLAGCNKLTDGCLAYLKRASGLALLDLRGCKGVT
RQGCEGFISDLSHCVLFCMTEEKLIQRIS
NT seq 3510 nt   +upstreamnt  +downstreamnt
atggaayataagcgtcgaccaagattcagcaagcggctgcggtcgggcacgcggcggcgc
taccatgacgatggtatctcggacgacgagatcgaggggaagaggacctttgacctggag
gagaagctgacgagcgagaggttcacctcagacagggtcaaacgcatggaggggaaagac
ctcacgtttgagtacatccaaagaggtgggttgagggacccgatcatctttgagaagcca
gacggactgggcatcaagatgccagatccagacttcagtgtgaacgacgtcaagatattt
gtcggcagcaggcgtatgatggatgtgatggatgtcagtactcagaagggtatagagatg
tctatggcccagtggagacgttactacgagacgcccccctcccagagggacaaactctac
aacgtcatcagcctggagtttagccacaccaagctggagaacctggtccagaggcctgca
tcggtggacatcatagactgggtggacaacatgtggcctcggcacctgaaggagagacag
agagactccaccaactccatcacagacatgcagtaccccaaagtgcagcagtactgtcta
atgagtgtgcagggctgctacacggacttccacatagactttggaggttcctcggtgtgg
taccacatactgcgtggaggcaaggtgttctggctgatcccgcccacgcctcagaacctg
gagctgtatgaggactgggtgttgtcagggaaacagggagacatcttcctgggagacaag
gcccaggactgtcagaggatagactgtttgatccatgcggtcctaacactccagtggaca
ccctggtgtttgggaaacttcctccacagcttcaacatccccatgcaactcaacatctac
agcactcgaggaacaggacacggtcttaccagagacccctccacctgtgagtcggtcaac
gggcacacccaggaggaggatgaagagggtgctcccccgacccagggctctaagcctggg
gtgaaggttcacctcacgccctttgagctggaggggctgtggaacctgctggggaagcta
gagtctctgccctcacagaagaactgtgtcccggcgggcatacacgatgctcccgctctg
ctgcacgacatcagggccctgctgaaggagcatgctaatgacatccccaaactgtcctac
actggcaagcccatcgtcaagtggcccaagaggccgtcgtggtaccagccccctccccct
cctcccccggtggctcgtcccaagctgtctgccacggtggtgcccccgcgaccccagaag
cccgcttcctccatgtccgtgctgcggcggcggcgtgtgcggtgtaagcgctgcgaggcg
tgcgtcaggacggagtgcggggactgtaacttctgcagggacatgaagaagttcggaggg
ccggggaaactcaaacagacctgcgtgctccgacagtgtctggcgccgggtctgcccctg
tcagtggtgtgtgagatctgtgcagaggggaaccaggagggaggagaggggccagtcttc
gccctcaccctcatggagtgttccaactgtgcccagatagcccaccccgcctgcctgaag
gtaacaggggatggtgtggtgaatacagatctgcccagctgctgggagtgtcccaaatgt
gttctgggaatcaccgacactgagtcttcgggcaccgatgatgatgacagtggggcgtcc
gttggcctcggcgctggcgtgagctccctctccgccacccaggggcctctaggggtctcc
atggagccaggctctgctcctgggttgggggatgagggctggggcagggcgatactgcta
tacccagggctggttcccaaccccccctcctggttctccgaggcgccccttccctcccct
gggcagctactactagagcagcacggcctcaagcgggcggggagatgggcaagcgggcgc
aggaagagggtgaagggggacaagaataaaatgttacacgcgaaacgcaagtcttcttcg
tatctcgacggtcgcatcgccaagatctaccgtcgccacagccgagacgacgacgactcg
ggcagtgatgatgatgatgatgatgaaggctccaggggcggaggaggaggcgcggcgcag
aagatgtccgggccacgccctcgcggcagtggctccgcctctcggagaggttacgggact
gggaggcggggcatttggagaggctcctcccacagaggggcaggccgcggaagcgggctg
gcccctcactcctccctgaagatgaggcgcggcagaggagggctgggggcgggccgaggg
gatagagagggggggcgtagggagaggggagggagagtgcgcctccggggaggcaccagg
atgcagagacgcagggacgagtcagaggaggatgacgacgacgatgatgacgacgacgag
gaagatgacgacagcgaggaagatcggcagcatcaccaccggcaacgccgcaggcggagg
agaacggacgacgatgaggaagacgacgatgaggaagacagctcggcccgggacctggag
ggggaggatgaggacgtggaggatgaggaagacgacgagaaccggtcagactctgaacca
gagcctcccgtcctcctggtgtctgaccttaacgacgacctcctaaacggctcgtacctg
acagtgaccctacagcgcccccccagggccaaacgccaccccggctccatcgtgcccaag
ctggaggccgccatgtctcccagaacccacggcggcggtccaggttargtccagcataaa
accctcgggaagacgcggcacaaaaacggcacggtcgccaccggcaacggcctggcccag
cccgccaagaatccagtcggccggccgcctcgtcatcgtatcaacaatccccacggcgac
acagcagacagggaaagagagagggacactggtctgaaggagttgatgatwgcaggttgc
tcctggtcgtccatgtcagccctgtccacccccagcctgccgtgcctccgtaccctggac
ctgcgctgggcagagggggtcaaagacacccagatcagggacctggtcacaccaccaggt
tgtgacagtcggtctcggctgcgtggctgtgtggcgctgcgtctagccggcctggacatc
agtgactccaccctgaggctgattctccgtcacatgcccctgctagagaggctggacctg
gcccactgcagggacctcacggatcagtccgtctgcctgctcaccgccgccggcacacgc
aacacgctcacggagatcaacctcgcaggctgtaacaagctgacggacggctgtctggcg
tacctgaagagggcgtctggcctggcyctgctagacctgcggggctgcaaaggtgtgacg
cggcagggctgtgagggcttcatctcggacctctctcactgcgtcctgttctgtatgacg
gaggagaaactcatccagaggatatcgtaa

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