Salvelinus sp. IW2-2015 (Arctic char): 111972008
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Entry
111972008 CDS
T05762
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04060
Cytokine-cytokine receptor interaction
salp04068
FoxO signaling pathway
salp04210
Apoptosis
salp04217
Necroptosis
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111972008
04068 FoxO signaling pathway
111972008
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111972008
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111972008
04217 Necroptosis
111972008
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111972008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111972008
04052 Cytokines and neuropeptides [BR:
salp04052
]
111972008
04090 CD molecules [BR:
salp04090
]
111972008
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111972008
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Tumor necrosis fators
111972008
CD molecules [BR:
salp04090
]
Proteins
111972008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
111972008
NCBI-ProteinID:
XP_023854600
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Position
LG13:complement(20038751..20041748)
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AA seq
387 aa
AA seq
DB search
MSSLLSTCPATAPVTWLSFLLREEWMESVSERWCELVTDLPSVCGWKLWVPVTQVFITLR
CSDRSTHLLHTEATHTLTLLSHTLCTMSGTQGYPYPQVFLVDSGRGPQPSVQPPGMLPCW
SFPPAHERVMERGRVRGCRGVGSWSLXMLPCWSFPPAHERVMERGRVRGCRGVGSWSLAM
ALLFLLLLVFGALGLGAYQIFKLQTQLNGIQQEMNIEIDGRGPEKLVGDLPEINPNRGKT
AGRPAAHVIGRIEKHVSQNTLRWEPKAGRAFTEGGVVYRDGGLQVNETGLYHIYSRVQFE
ANHCTPTDALVHSVFVRRPWSSKPLTLIESHREGYCSSGSNGRVWTSGSYLGSTLQLEKQ
DWVYVNVSHPAMLSHTHHANFFGLHKI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagctcattattatctacttgtcctgcaacagcaccagtcacctggctaagtttcctt
ttgagagaggagtggatggagagcgtgagtgagaggtggtgtgagcttgtcacagaccta
cccagtgtgtgtgggtggaagctgtgggttccagtcacccaagtttttataacactgaga
tgctcagatagaagcacacacctcctgcacacagaggcgacacacacactcacgctcctc
tctcacacgctttgcaccatgagcggtacacagggctatccttacccccaggtgtttcta
gtggacagtggtagaggtccacagccgtcggtccaacctccaggcatgctgccctgctgg
tccttccctcctgcccacgagagagtgatggagcggggcagggtcagaggctgcaggggg
gttggctcctggagcctggncatgctgccctgctggtccttccctcctgcccacgagaga
gtgatggagcggggcagggtcagaggctgcaggggggttggctcctggagcctggctatg
gctctgctgtttctgctgctgctggtgtttggagcattgggactgggtgcctaccagata
ttcaaactacagactcaactcaatgggatacaacaggaaatgaacatagagattgatggt
cgtgggcctgagaagctagtgggtgaccttccagagatcaatccaaacagagggaagaca
gccggcagacctgcagcacatgttataggtcggattgagaagcatgtttcacagaatacc
ttgcgttgggagccaaaggcggggcgggccttcacagaggggggcgtggtctatcgggat
ggcggtctgcaagtcaacgagactgggctctaccacatctactcccgggtgcagtttgaa
gccaatcactgcacccctacagatgccttggttcactctgtgtttgtgaggaggccctgg
agctccaagcctctcaccttgatagagtcgcacagggagggctactgcagctcaggctct
aatgggcgtgtctggacctctgggagttacctgggctccacattgcagctggagaagcag
gactgggtctatgtgaacgtctcccacccagccatgctcagccacactcatcatgccaac
ttctttggactccacaagatctag
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