Salvelinus sp. IW2-2015 (Arctic char): 111972691 Help Entry 111972691         CDS       T05762                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp04115   p53 signaling pathway salp04145   Phagosome salp04148   Efferocytosis salp04350   TGF-beta signaling pathway salp04510   Focal adhesion salp04512   ECM-receptor interaction salp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:salp00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     111972691   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111972691  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     111972691    04148 Efferocytosis     111972691   09143 Cell growth and death    04115 p53 signaling pathway     111972691   09144 Cellular community - eukaryotes    04510 Focal adhesion     111972691   09142 Cell motility    04820 Cytoskeleton in muscle cells     111972691  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:salp04131]     111972691   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:salp00536]     111972691 Membrane trafficking [BR:salp04131]  Endocytosis   Phagocytosis    Opsonins     111972691 Glycosaminoglycan binding proteins [BR:salp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111972691 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  111972691 NCBI-ProteinID:  XP_023855494 LinkDB All DBs Position LG14:949448..978839 Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAENRDDNSVYDLFELVQVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPATARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSVQTDEI VLIDDTINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKFLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSATCGGGAQTRKRLCNDPXPKYGGKECQGDSKAS QQCNKNACPIDGCLSNPCFPGTKCTSFPDGTWRCGKCPSAYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPTRYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADLMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIADDRDNCPFVYNPRQYDYDRDDVGDLCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTTGQVKTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctgttgatgctttggacctgcgagagcgtacgagtt gcagagaaccgagacgacaatagcgtgtacgacctgttcgagctggtccaagtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgagctccccgagagttccttcagggacctcatcgattcc atccatgccgagaggggcttcctcctcctgcttaacttcaagcagtttaagcggaccagg ggctccctcttgaccgtggagaagcgggacggatccggagccgtgttcgagatagtctcg aatggaaaagcgaacaccctggatgtggttttctctacagtgaataagcaacaggtggtc tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgcgcgcagctgtatgttggctgtgaggaggtgaacacggctgaattggacgct cccatccagagcatcctcactcaggagactcccgccacagcgcgcctcaggatcgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgtgcgctttgtttttggaacc actttggacgcgattctgcgcaacaagggatgccaaaactctgttcagactgatgagatc gtccttatcgacgacaccatcaatgggtccagccctgccattaggacggactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgtgaggacctggctggcatg ttcaaggagctgaaggggttgggagtggtggtgaaggagctgtccaatgagctgcgcaaa gtgacggatgagaacaagtttttgatgaacagagttgggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgtaccgagtgc acttgtcaaaactctgccaccgtgtgccgtaagatctcctgccccctgatcccttgtgcc aacgcaaccgtgcccgatggagagtgctgcccrcgctgtggaacaccgagcgactatgcg gaggatggatggtccctgtggtctgaatggacccactgttccgtgtcttgtgggcggggc atccagcagagaggccgctcctgcgaccgcatcaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgcctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagagggg agacagactgagaagtgcaccaagtcaccctgcccaatcaacggtaactggggaccctgg tcgctatgggatacctgctctgccacctgtgggggaggagctcagacacgtaaacgtctc tgcaacgaccccrcccccaaatatggtggtaaggagtgccagggtgactccaaggcttct cagcagtgcaacaagaacgcctgtcccatcgatggctgtctgtccaacccttgcttccct gggaccaagtgcaccagcttccctgatggaacatggaggtgtggaaaatgtccctctgct tactctggtgacggcatcaagtgcaaggacattgatgagtgcaaagaggttcctgacgct tgcttcgtattcaatggagtacaccgctgtgagaacactgaccctggctacaactgtctg ccmtgtcccacacgctactctggacctcagcccttcggcaggggagtggaggaagccacc gccaagaaacaggtgtgtacaccacgtaacccctgcctggatgggagccacgactgcaac aagaacgcccgctgtaactacctgggacactttgccgacctcatgtaccgctgtgagtgt aagcctggctatgctggraayggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcttgt gacaacgatgatgacaatgatggtattgctgacgacagggataactgtccgttcgtgtac aaccccaggcaatatgactatgacagagatgatgttggagatctttgtgataactgtcct tacaacagcaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtggacattgacggagatggtattctgaatgagaaagacaactgcccgtacgtctacaac gtggaccagagagacaccgacctggacggtgtgggagacatgtgtgacaactgtcctctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagataagtgtgacagc aaccaggacatcgatgaagacggccaccagaacaacctggacaactgcccctacatcccc aacgctaaccaggccgatcacgacaaagacggaaagggagacgcttgcgaccacgatgat gacaatgacgggatcccagacgagaaagataactgcagactggccttcaaccctgaccag atcgactccgatggtgatggtcgaggagacgcttgcaaagacgactttgaccaagacaat gtgcctgacatctacgacgtgtgtccggagaactttgacatcagcgagaccgacttcaga aagttccagatggttcccctggaccccaagggaacgtcccagatcgaccccaactgggtg gtcagacatcagggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggtaccttcttcatcaacacagagaga gatgatgactacgccggctttgtgttcggctaccagtccagctccaggttctacgtggtg atgtggaaacagatcacacagacctactggaacaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaactccactactggacctggagagcacctcaggaac gctctctggcacactggcaacaccacaggacaggtgaagactctttggcacgaccctaag aacattggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatggctgattctgggagcata tacgacaagacgtacgcaggcggaagactaggcctctttgtcttctcccaagagatggtg tacttctcagacctcaagtatgaatgcagagatgcataa

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