Salvelinus sp. IW2-2015 (Arctic char): 111974358
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Entry
111974358 CDS
T05762
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6-like
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04115
p53 signaling pathway
salp04210
Apoptosis
salp04217
Necroptosis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111974358
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111974358
04217 Necroptosis
111974358
04115 p53 signaling pathway
111974358
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111974358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
salp04050
]
111974358
04090 CD molecules [BR:
salp04090
]
111974358
Cytokine receptors [BR:
salp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
111974358
CD molecules [BR:
salp04090
]
Proteins
111974358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Miga
MLANA
Cytadhesin_P30
DUF6479
DUF6550
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
111974358
NCBI-ProteinID:
XP_023857849
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All DBs
Position
LG15:complement(32436499..32449899)
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AA seq
329 aa
AA seq
DB search
MSNIVLHYMVVLLIWALKPMAAAQSGLKLTRTGGSVRNLTQRDISCRENLEYPHDNICCL
NCLAGTYVKAYCTRSFEHGTCETCEFDTYTEHGNGLRQCFKCTTCHSDQVTTKACTITQD
RECRCKPGLFCAPDQACEVCKKCLRCKENEVRLKNCTATSNTVCETRLPTSSTISAGVVV
IVVAVLGITAAIAAVSWKRRNCCKRRDSQNNPSETLKIEVDDQNNRSIEERQNNRSAVQD
DTQLHPLLELTQVVGANASSADEDNGLGDSLHNTTNSSRSSLSALPSSSPLSSPSAKRQP
GTGATVRAAAQDMLMRTYPLSLVFSQSLF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatagtcctacattacatggttgtcctcctaatctgggccctcaaacccatg
gcggcagctcagtctggccttaaattgacacggacaggaggcagcgtcagaaacttgaca
cagcgggacatctcatgccgggaaaacctggagtacccacatgacaacatctgctgttta
aactgcctagctggtacatatgtcaaagcgtactgcacgcgttcctttgagcatggaacc
tgtgagacctgtgagtttgacacgtacactgaacatggcaacggactacgacagtgctty
aagtgcaccacgtgtcactcagatcaggtgactacgaaggcatgcaccatcactcaggac
agagagtgccggtgtaaacctgggttattctgtgcccctgaccaagcctgtgaggtgtgc
aaaaagtgcttaagatgtaaagagaatgaggtgaggctgaagaactgcaccgctacgtcc
aacacggtctgtgagaccagactgcccacatccagcaccatctcagcaggtgttgttgtg
attgtggtggcagtactgggtatcactgctgcaattgccgctgtctcttggaagaggcga
aattgctgtaaaaggagagactcccagaataatcccagtgagacgctgaaaattgaggtg
gatgatcaaaacaacaggtcaattgaggagaggcagaacaaccggagtgctgtgcaggat
gacacacagctccatcctttgctggaactgacccaggtggtgggcgccaacgcctcctca
gccgacgaggacaatggactgggcgacagcctccacaacaccaccaactcctcccggtcc
agtttgtctgcactaccctcatcctccccgctttccagcccttcggccaagaggcagcct
ggcactggggctacggtgagagcagcagcacaggacatgctcatgcgaacctaccccttg
tcccttgtcttctctcaatctcttttctaa
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