KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111976112
Entry
111976112         CDS       T05762                                 
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10375  tropomyosin 4
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04260  Cardiac muscle contraction
salp04261  Adrenergic signaling in cardiomyocytes
salp04814  Motor proteins
salp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    111976112
   04820 Cytoskeleton in muscle cells
    111976112
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    111976112
   04261 Adrenergic signaling in cardiomyocytes
    111976112
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:salp04812]
    111976112
Cytoskeleton proteins [BR:salp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     111976112
SSDB
Motif
Pfam: Tropomyosin CCDC39 HmpF CLZ CEP135_TSGA10_CC CCDC170_1st PUMA_CC ATG16 Sec2p CENP-F_leu_zip Rod_CreS DUF745 TMF_DNA_bd Pex17 DUF3450 Laminin_I ERM_helical LEKR1 Nuf2_DHR10-like CCDC18_1st At4g04980_N CC_Bre1 MscS_porin DUF1664 FPP FKBP15 CRWN_N DUF2730 SlyX NPV_P10 Fez1 CCDC170_2nd CCDC89 DUF16
Other DBs
NCBI-GeneID: 111976112
NCBI-ProteinID: XP_023860631
LinkDB
Position
LG16:11633007..11676711
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEDELLSLQKNLKGTEDELDKY
SEALKDAQEKLEQSEKTAADAEGDVAGLNRRIQLVEEELDRAQERLSTALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEVSELKCSDLEEELKNVTNNLKSLEASSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaagctggacaaggagaacgcaatcgac
cgtgcagagcaggccgagaccgataagaaggcagcggaggacaagtgcaaacagctggaa
gacgagctgctgagcctgcagaagaatttgaaggggactgaagatgagttggacaaatac
tctgaggccctcaaagatgcccaggagaaactggaacagtctgagaagaccgccgcagac
gcggagggtgatgtggcgggtctgaaccgcaggatccagctagtcgaggaggagttggac
cgggcccaggagaggctgtctaccgcgctgcagaaactggaggaggcagagaaggccgca
gacgagagcgagagaggaatgaaggtgatagagaacagggcctccaaggacgaggagaag
atggagatccaggagatgcagctgaaggaggccaagcacatcgctgaggaggccgaccgc
aaatacgaggaggtggcccgtaagctggtgatcttggagggagagctggagagagctgag
gagagggcagaggtctcagaacttaaatgcagtgacctggaggaggagttgaaaaatgtg
accaacaacctcaagtccctagaagcctcgtctgagaagtactcagaaaaagaggacaag
tatgaggaggagatcaaggttcttagtgacaagctgaaggaggctgagactcgtgcagag
tttgcagagaggactgtggccaaactggaaaagtccatcgacgacctggaagatgaactg
tacgctcagaagctgaagtacaaggcaatcagcgaggagctggaccatgccctcaatgac
atgacctccttgtag

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