Salvelinus sp. IW2-2015 (Arctic char): 111976112
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Entry
111976112 CDS
T05762
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10375
tropomyosin 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
salp04814
Motor proteins
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111976112
04820 Cytoskeleton in muscle cells
111976112
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111976112
04261 Adrenergic signaling in cardiomyocytes
111976112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111976112
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
111976112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
ATG16
TMF_DNA_bd
Crescentin
CENP-F_leu_zip
DUF745
Laminin_I
DUF3450
ERM_helical
DUF1664
Exonuc_VII_L
FPP
Lebercilin
Mce4_CUP1
MscS_porin
AAA_13
Nuf2_DHR10-like
NPV_P10
Fez1
SlyX
FUSC
DUF16
Motif
Other DBs
NCBI-GeneID:
111976112
NCBI-ProteinID:
XP_023860631
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Position
LG16:11633009..11676711
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AA seq
284 aa
AA seq
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MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEDELLSLQKNLKGTEDELDKY
SEALKDAQEKLEQSEKTAADAEGDVAGLNRRIQLVEEELDRAQERLSTALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEVSELKCSDLEEELKNVTNNLKSLEASSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaagctggacaaggagaacgcaatcgac
cgtgcagagcaggccgagaccgataagaaggcagcggaggacaagtgcaaacagctggaa
gacgagctgctgagcctgcagaagaatttgaaggggactgaagatgagttggacaaatac
tctgaggccctcaaagatgcccaggagaaactggaacagtctgagaagaccgccgcagac
gcggagggtgatgtggcgggtctgaaccgcaggatccagctagtcgaggaggagttggac
cgggcccaggagaggctgtctaccgcgctgcagaaactggaggaggcagagaaggccgca
gacgagagcgagagaggaatgaaggtgatagagaacagggcctccaaggacgaggagaag
atggagatccaggagatgcagctgaaggaggccaagcacatcgctgaggaggccgaccgc
aaatacgaggaggtggcccgtaagctggtgatcttggagggagagctggagagagctgag
gagagggcagaggtctcagaacttaaatgcagtgacctggaggaggagttgaaaaatgtg
accaacaacctcaagtccctagaagcctcgtctgagaagtactcagaaaaagaggacaag
tatgaggaggagatcaaggttcttagtgacaagctgaaggaggctgagactcgtgcagag
tttgcagagaggactgtggccaaactggaaaagtccatcgacgacctggaagatgaactg
tacgctcagaagctgaagtacaaggcaatcagcgaggagctggaccatgccctcaatgac
atgacctccttgtag
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