Salvelinus sp. IW2-2015 (Arctic char): 111977095
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Entry
111977095 CDS
T05762
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04514
Cell adhesion molecule (CAM) interaction
salp04620
Toll-like receptor signaling pathway
salp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111977095
04514 Cell adhesion molecule (CAM) interaction
111977095
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111977095
04672 Intestinal immune network for IgA production
111977095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
salp04050
]
111977095
04090 CD molecules [BR:
salp04090
]
111977095
Cytokine receptors [BR:
salp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
111977095
CD molecules [BR:
salp04090
]
Proteins
111977095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
111977095
NCBI-ProteinID:
XP_023862171
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All DBs
Position
LG17:complement(26070172..26087342)
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AA seq
313 aa
AA seq
DB search
MIVLLLCILSVLTMIYSCDPETQYLKNGECCSMCGPGTKMLSSHSGCFDPHCMPCQEGEY
QHAFTDKNRCKLQPYCDPNKNFEHSTNRNKTSLSPCKCKTGYHCSSEECLTCVPHTKCRP
GEEVKSKGSPIHDTVCKACPLNMFSSDSSAESKCKLWTVCKSEFKTEAEGTATSDTVCVP
VPSSYGTIITIVMAFLAAGVLGIVLFKFRGQLGEACKKANESCMDFNLKRGTKRATADGK
AEEGNAEGPEEGREQLQPMIQFGEPPSTLYPPLPGLQIPEEVEAKDVSEKGHLVVQEEGK
SHHVSDTQSVFYE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttctgcttttatgtattctgtcggttttgaccatgatttactcatgtgatcca
gaaacacagtatttgaagaatggggagtgttgcagtatgtgtgggccaggcaccaagatg
ttatccagccatagcggttgttttgatccacattgtatgccatgccaagagggggaatac
cagcatgcattcacagacaagaaccgctgtaaactgcaaccatactgcgacccaaataaa
aactttgagcacagtaccaataggaacaagacaagcctcagcccatgcaaatgtaagact
ggataccactgttccagtgaagagtgcctgacgtgtgttccacatactaaatgcagacct
ggagaagaggtcaaatccaaaggtagccccatacatgacacagtgtgtaaggcctgtcct
ttaaacatgttctccagtgacagttctgcagagagcaagtgcaagctatggacagtttgt
aagtctgaattcaaaactgaagccgaagggacagccacctcagacacggtctgtgtgcca
gtacccagttcctatggaacaataatcacaattgtaatggcctttctagctgctggggtt
ttgggcattgtcctgttcaaatttagaggtcaactcggagaggcctgcaagaaagcaaat
gaatcctgtatggattttaatcttaagaggggaactaagagggctacagcagacggaaaa
gcagaagagggaaacgcagaaggacctgaagaggggagggaacaacttcaacctatgatc
caatttggagagccaccatcaacactatacccaccattaccaggtcttcaaataccagag
gaggttgaagctaaagacgtgtcagaaaagggacatttggtggtgcaggaggagggtaaa
tctcaccatgtttctgatacacaaagtgtattttatgaatag
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