Salvelinus sp. IW2-2015 (Arctic char): 111977296
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Entry
111977296 CDS
T05762
Symbol
gli2
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111977296 (gli2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111977296 (gli2)
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
111977296 (gli2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
111977296
NCBI-ProteinID:
XP_023862463
LinkDB
All DBs
Position
LG2:complement(23986379..24105285)
Genome browser
AA seq
1519 aa
AA seq
DB search
METSAPTATEKKEHKGSGLDGSSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGHHGLAGSPVISDGISLIRLSPHAAGTGDSPFSPPHSYVHPQMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKEHGLFSLPPPPPGANPTDYYHLMASGRSTYG
DLIMQTGAAAAAAAAAAHLPDYISPVDVSRFSSPRLNPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHPINPMAYQQLLSQQRGLS
AFGHTPPLIQPSPSFAARQHAHALAASTLNTTHNTSSSESNQNAGGDPAVSSTVNPMITK
RHKVKTEAEGPRPISPCFQEHVLDLSEELDKDECKQEPEAVYETNCHWVGCSKEYDTQDQ
LVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSGRGMDGKMEAN
STIRGAEDCLQVKSIKTENSITYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSF
GDLSALDDPPMVDSSTLSPRNSVGVGLGLHKGGGVTIKLENIKKERLKNVRVSCPWANSG
PQAPQVRNTKLPPIPAVGSLLENSNMIAPPGPYPGQRLGDLSSCEVTMLNQLNEQGRRDS
NTSTASSAYISRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEAS
QCGGGNLSSLLSLTPAQHYHLKAKYAAAIGGAPPTPLPNMERMSLRTRMALYGDHAQERE
SLSHSQLFHPPTASVPRRCSDIGYGSHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPRVQ
RYNSMNSMNPNSMMPPPSADRRGLAMQSYTRSDGSLHHHPFAPRPPSISENVVMETMAVD
GLDHAGDEDMVLPDDVVQYLRSQNTGPGQSAGPADYANSQSQGGFQVQRNMTSSQQQFYG
QRRMAMVDANMPLSGSGQAPLPPYQMSPGSGSQQQQYPASHSMNNKNNMPVQWNEVSSGT
VDATATSRLTKQNLLRNNNLAMVQQRQNFGHFQGRMGSNSNQQVMPMNQNMVLQGYTQRS
NSQWINSVQQQQRQPCSMNYPEQMSPQQGYGQEIIPVPNSGSGNGSLRPNFNGMALPNGR
VMATHNNPDTQIYRSRTQVESSAPHMIQVDQQNYSISSQQQDVNTGNRAGMQPRPPMEPK
SMSSRQHSGSRSMMQQNRFPQSDLHHNTSEASPKRPGGTAAHTGGHNRDSNSNASMFYAG
QIQMFEPNNNHNVSFNSPMSPFMGQTPGGTTVTMASPGVNQVTSTVDSSGSSGSISGVEH
TQIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRNSVTLASVPAGIGNMAIGD
MSSMLTTLAEESKFLNMMS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgctccgacagccactgagaaaaaggagcataagggatcaggtctggat
ggaagcagcttctcagacctgccaaagaaaccatctcccactactgtgaccagaggtcct
caccatctcttccccacgtttcacacaccgatcccaatcgatatgcgtcaccacgagggg
aggtatcattacgagccacatcccctccacgccatgcatggacatcatggcctagcaggc
agcccggtcatctcagacggcatctctctgatccgtctgtccccccacgcagcagggacg
ggggattcccccttcagcccccctcactcctacgtccacccccagatggagcactacctc
cgctccatgcacagcagccccaccctctccatgatttctgctgcccgtggactcagccct
gcagaagtgacccatgagcacctgaaggagcatggtctgttcagcctgccccctccacct
ccaggtgccaaccctacagattactaccacctcatggccagtggcaggagcacttacgga
gacctcatcatgcagaccggggcggccgcagcagcagcagccgcagcagcacacctgccc
gactacatcagccctgtggacgtgtcccggttctccagccccagactgaaccccaggctg
aacagaaagcgagccctgtccatctcccctctctcagatgccagcatcgacctgcagacc
atgatccgtacctcgcccaactccctcgtggcctacattaacaactcacgctccagctct
gcagccagcagctcctacggacacctgtcagtcagcggcatcagtccgtcgttcaccttc
ccccaccccatcaaccccatggcctaccagcagctgctcagccagcagagaggcctgagt
gcgttcggccatactcctccccttatccagccctcgccctcattcgctgcccgccagcat
gcccacgccctggcagcctccaccctcaacaccacccacaacacttccagctctgagtcc
aaccagaatgctggtggtgacccggcggtgagcagcacagtcaaccccatgatcaccaag
aggcacaaggtcaagacagaagcagaaggaccccggcccatatcaccatgctttcaggag
catgtcctggacctgagtgaggagctggacaaagatgagtgtaagcaggagccagaggct
gtctacgagaccaactgtcactgggtcggctgcagcaaggagtacgacacccaggaccag
ctcgttcatcatatcaacaatgaccacatccatggggagaagaaggaatttgtgtgtcgc
tgggatgagtgctcgcgggaacagaagcccttcaaggctcagtacatgctggtggtccat
atgaggcgacacactggagagaagccacacaaatgcacatttgaaggatgctgtaaggcc
tactctcgcctggagaacctgaagacccatctgaggtctcacacaggggagaagccttac
gtctgtgaacacgagggctgcaacaaagccttctccaacgcctcagacagagccaagcac
cagaacagaactcactccaatgagaaaccctacatctgtaagatccctgggtgcactaag
cgctacacagaccccagctctctcaggaagcatgtgaagacggttcacggacctgaggcc
cacgtcaccaagaaacaacgtggcgatgtgccccccaggggtcctcctaaggggaatgga
gagaacgaggcaaatgccaaacagagtggtagagggatggatggaaaaatggaggccaac
agcaccattagaggagcagaggactgcctgcaggtcaagtcaatcaagactgagaactca
ataacgtatcaatccagcccgggcggtcactcgtcatgtagcagtgagccgtcgccactt
ggcagtgcccacaacaatgacagtggagtagagatggccctgcacagtgggggcagcttt
ggggacctgagtgcactggacgaccctcccatggtggactcctccaccctctccccccgc
aactcggtgggggtgggtcttgggcttcataaagggggaggagtcaccatcaagctggag
aacatcaagaaggagaggctgaagaatgtgagggtctcttgtccctgggccaactctggt
cctcaggcacctcaggtccgaaacaccaagctgcctcccattcctgctgttggttccctt
ctggaaaactctaatatgatcgctccacccgggccctaccctggtcagcgtcttggtgac
ctgtcatcatgcgaggtgaccatgctgaaccagctaaacgaacagggccgccgggacagc
aacaccagcactgccagctcagcctacatcagccggcgctcctctggcatatccccctgc
tactccagccgccgctcctccgaagcctcgcagttcagcaaccgccacaacaacatcagc
tcagccgactcctatgaccccatctccacagacctgtcccgtagatccagcgaggccagc
cagtgtggaggtggaaacctctctagtttgctcagcctcacccctgcccagcactaccat
ctcaaggccaagtaygctgctgcaatcgggggagctccacctacacctctgcccaacatg
gagcgtatgagcctcaggaccaggatggccctgtatggggaccacgcccaggaaagagag
agcttatcccactctcaactgttccacccacctaccgcatcagttcccagacgctgcagt
gacatcggctacggtagccatagcatgatgccccacgaggtccctgggaaccttccccgg
cgagccagcgaccccgtccgcagacctaccctagacccactgtcccttccacgagtccaa
cgctacaacagcatgaacagtatgaaccccaacagtatgatgcctcctccctctgccgac
cgccggggcctggccatgcagagctacacgcgatctgacggaagcctgcaccaccacccc
ttcgccccacggccccccagcatctcagagaacgtggtgatggagaccatggccgtggac
gggctggaccatgcaggagatgaggacatggtgctacctgatgatgtcgtacagtacctc
aggtctcagaacactggccccggccaatcagcaggccccgccgactacgccaacagtcaa
tcacaaggcggcttccaggtccagaggaatatgacctcctcccaacagcagttctatggg
cagaggaggatggccatggtggatgccaacatgcccctgtctgggtcaggccaggctccc
ctacccccctaccagatgagccctgggtctggctcccaacagcagcagtacccagcctct
catagtatgaacaacaagaacaacatgccagtccagtggaacgaggttagctcagggact
gtggatgctacagccacctccagactcaccaagcagaacctcctcagaaacaacaacctg
gccatggtccagcagagacaaaactttgggcatttccagggtagaatgggtagtaacagt
aaccagcaggtgatgcccatgaaccagaatatggtgctacaaggctacacccagagaagc
aactcccagtggatcaactctgtccaacagcaacaaaggcagccatgcagcatgaactat
cctgagcagatgagtccccagcagggatatggccaagagatcatccctgtccctaactct
ggatctgggaatggcagcctacgacccaactttaatggcatggcactgcccaatggcagg
gtgatggctacacacaacaatcctgatacgcagatctacaggtcaaggactcaggttgaa
agctctgccccccacatgattcaggttgaccagcagaactacagtatttcttctcagcag
caagacgtcaatactgggaacagagctgggatgcagcccaggcctcccatggagcccaag
tctatgagcagtagacaacactcagggtccagaagtatgatgcagcagaaccgtttccct
cagtctgacttacatcacaacacctctgaggccagtccaaagaggccgggtggcaccgca
gcacataccggcggacataacagagactcaaactccaatgcttcaatgttttatgctggc
cagatccagatgtttgaacccaataacaaccacaatgtgagcttcaactcccccatgtcc
cccttcatgggccagactccgggaggcaccactgttaccatggcatctccaggggtcaac
caggtcaccagcaccgttgactcatccggctcctctggatcgatctctggggtggagcat
acccagatcgactttgacgccatgttggatgatggagaccactccagcctgatgtcaggg
accctaagccccggactcctcaccagcctgtcccagaattcctcgaggcttaccaccccc
cgtaactctgtgaccctggcctctgtgccagcagggatcggtaatatggccatcggagac
atgagctccatgttgaccaccctggctgaggagagcaagttcctcaacatgatgagctaa
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integrated database retrieval system