Salvelinus sp. IW2-2015 (Arctic char): 111978041
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Entry
111978041 CDS
T05762
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111978041
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111978041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111978041
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111978041
Membrane trafficking [BR:
salp04131
]
SNARE
SNARE associated proteins
Others
111978041
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
111978041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
111978041
NCBI-ProteinID:
XP_023863571
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All DBs
Position
LG18:complement(11462971..11479342)
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AA seq
1068 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGPLPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTNRKESWDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKETWPCDL
EISNMEKNGNAKRPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSEX
QGHVTHLTGPSNPASLGSDQEEPSTKTHVPSNVYSHIEGPSSDCVESTSTTPHLPVTETP
QEKKTEYSVKSTSAPSAHMNLHRTTSVLSRTVSTDSVAHSHSWISEDDIYKPHLEELADP
DDSLLGSGPACVNGFTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTVGM
WRDYYCELSPFEFRLYQNAEERTCCDNCSLLRCEDARVTSXEGRFDLSFPGKRLLMRAAN
RDEAEDWVDRIAEAVNKCRPLNLIDDQWEVLQLSDSSVTPDEFPKSSPSSAXSVPTSPER
GGTVVEQEQQLELDWTRPTDPESDAIKEAVLYFCQDSEARNWTPLVFSLSLETLKGFRMQ
DGQKVLRFSHPIEGIRDVVPDVSLGGPAFFRVVTARDTLKLRAKSSEEARAWRGLIRGAL
DSYLESGEDWEPESPGVAPGAGGNIHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFKCA
GCPKVMGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALKLLAQ
IEHEPLLNLDLLNSDLWEHAEAMAQAQSLRQRLRLLGDYLLTCRSGACKNIQTRCDPLLL
GPRTYLLESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHAS
DIIFPFQFDTTTRCKECKAVFHATCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggtgaccagcgaggatggtgacgccaacctgctgtgctgcgcactggaggccatcttt
atccatggcatcaagagcaaatatgttcgctccgaggccgggggacgcggcaggaaaggg
gggtcccggggacccctcccccaacctgtgttctggagcctgctcaagacggtcactcac
ggtgatgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacctggcctccctg
ttccgcgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaatcgcaaggaatcc
tgggatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgagggggg
ccaggggtactggggaaggggattgggggggtctcagggtttaagaccccactgaattca
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggtcacgatcccaagagcccagacaaggagacctggccatgtgacctg
gaaatctccaacatggagaagaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcgtacgtgtcc
accccaggggcagaccacctctctgagaacactgccttcagtggctccgacagcgagarc
caggggcatgtcacacatctcactggcccctctaaccctgcttcactggggtcagaccag
gaggagccttccactaagacccacgtcccctccaacgtgtactcgcacattgaagggccc
tccagtgactgtgtagagagcacatcgacaactcctcacctgcctgtcactgagacgcca
caggagaaaaaaacagaatattctgttaagagcacctcggcgccttcagcccacatgaac
ctacaccgcactaccagcgtgctcagtcggacggtgtctacagactcagtcgcacattcc
cactcctggatctctgaggatgacatctataagccacaccttgaggaactggctgacccc
gatgactctttgctagggtctggcccagcttgtgtgaacggatttacctctccccctcca
gagcccgagaccccccagtctccccccagcgtggttcaccgcaggcagataggcctctcc
aaccctttccgcggactgctgaagctgggccacctggagcggcggggcacggtgggcatg
tggcgcgactactactgcgagctctcgcccttcgaattccgactctaccagaatgcagag
gagcgtacctgctgcgacaattgctccctgctgcgttgcgaggacgcccgcgtcacctcg
yccgagggrcgcttcgacctttccttccccgggaaaaggctcctcatgcgggcggccaac
cgcgatgaggccgaggactgggtggaccgcatcgctgaagccgtcaacaagtgccgcccg
cttaacctcatcgatgaccagtgggaggtgctgcagctctctgacagcagtgtaaccccg
gatgaattccccaaatcttccccttcatcrgccrcctccgtacccaccagtcccgagcga
ggggggactgtggttgagcaggagcaacagctggagctggactggacgcgtcccacagac
ccagagtcagacgccattaaggaagcggtgctgtacttctgccaggactccgaggcacgc
aactggactcctctcgtcttctccctctccttagagactctcaagggcttccggatgcaa
gacgggcagaaggtgctgcgrttctcccacccaatcgaggggatccgggacgtggtccca
gacgtttctctgggtggaccagccttctttagggtcgtaacggccagggatacgctcaag
ctgagggccaagagctctgaggaggcacgtgcctggaggggcctcatcaggggagccctg
gactcctacctggagagtggagaagactgggagcctgagagccccggggtggcacctggg
gcgggagggaacatccacagactggtgcagcatagactgaagggggacggggtgctgctg
gcccatctatgcacagtgcccacagagaaggggctggaccttcagggcttcaagtgtgca
ggttgtccaaaggtgatgggcgtctcccgagggaaagccagactgtgtgagttctcaggg
cagtactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgcatggtg
cacaactgggacctcgcacctcgggaggtctccaggcatgcccttaagctgctggctcag
attgaacatgagcccctgctgaaccttgaccttttgaactctgacctgtgggagcatgcc
gaggccatggcccaggcacagagcctcagacagaggctgcgtctcctaggagactacctg
ctcacctgccgcagcggagcatgcaagaacatccagaccaggtgtgatccacttttactg
ggtccaaggacatacttattagaatcaagccatctctacagtgtcatggacttacgacag
atagcggagggaatgtatgtggcctacctgaacactttgatccagtttgcctccaaccac
gtccaccactgtgacctttgtacccagaggggcttcatctgccagatctgtcacgccagt
gacatcatcttccccttccagttcgacactaccaccaggtgtaaagagtgtaaggccgtg
tttcacgcaacctgcaaggccaagtcgccttcctgtccacgatgcctgcgtcttcagagg
tacctcgagagagatctgcaggactaa
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