Salvelinus sp. IW2-2015 (Arctic char): 111979745
Help
Entry
111979745 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 4-like
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04081
Hormone signaling
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111979745
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
111979745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111979745
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
111979745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
111979745
NCBI-ProteinID:
XP_023866201
LinkDB
All DBs
Position
LG19:8009633..8059016
Genome browser
AA seq
999 aa
AA seq
DB search
MVAVETSPNSSPSAEWVGCLDKRPAERSGEDVDIILTRLKGVKAFQRFHPSLLLQICSCA
FYEYLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFGESILD
NTPRHATIVSRETSELLRIEQREFKSLWEKYRQCMAGLLAPPYGAMESGSNNDRLADKDS
LGSNTLSLMNKSLNKVQSEKLQRGGKVMRNAILSRAPHMIRDRKYHLKTYRQCCVGTELV
DWLVQQSTCVHTRSHAVGMWQALLEEGVLNHVDQELGFQDKYLFYRFLDDEEEDTPLPSE
EEKRESEEELPETILFLAQIGPDALLRMILRKPPGQRTGDDLEIIYDETCFTSVLSHLSN
TVKRELASVLIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVIYGKGVVCTLHEGDDFG
KLALVTDSARAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEQAVLVLEKSPR
ASTLGNIKYTVMSGTPEKILDHFLETMRMDTHHADPDPAVDDFVLMHCVFMPNSQFCQLL
MAHYHAVAPPGSEQERLEYAVTSKRRVLNLALRWAAVHTHHLQEEQAALTFLEELYGSVS
NDSRILRALKDFVPDLEKVVKLHSEEAKLKKQKVLLREFSNGDERLAKKQPIRNCDEILL
KVYCSDHTYTTIRVAVAATGREVTSAVADKLASNDDLLLVHLSSAGEKQMLRPNDVSVFS
TLSTNGRMFACPRDQLNALTPLPDQEGPSAGSMSSFELMSSKDLAYQMTLYDWELFSCVH
EHELLYHTFGRQSFRRTTANLDLFLRRFNQVQLWVVTEVCLCGQLSKRVQLLKKFIKIAA
HCREFKNLNSFFAIIMGMSNPAVSRLAQTWEKLPSKFKKFYAEFESMMDPSRNHRAYRLT
VTKIEPPIIPFMPLLLKDMTFSHEGNKTFIDNMVNFEKMRMIANTIRAVRHCRSQPFNPE
VCQPNKNHAEVRGYVRKLCVIDNQRTLTTLSYRLEPRRT
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggtggaaacatcccccaactcgtctccttcggcggaatgggtcggctgtctg
gataaaaggcctgcagagcgttccggagaggatgtggatattattctgaccagactaaaa
ggggttaaagccttccagaggttccacccctccttgctgctgcagatctgctcctgtgcc
ttctacgaatacctggagaaaggcatcaccttgttccgccagggtgacatcgggaccagc
tggtatgctgttctgtctggctctctggacgtcaaggtgtcggaaacagccaaccaccag
gatgctgtcactatctgcacgctgggaatcggcacggcgtttggagagtcgattctggat
aatactcctcgccacgccaccatcgtcagcagagagaccagcgaactgctccgcatygaa
cagagagagttcaagagtctatgggagaagtaccgtcagtgtatggctggacttctggcc
cctccatatggagccatggagagtggatccaacaatgatcggctggcagacaaagacagt
ctaggttccaatactctcagcctcatgaacaagtctctcaacaaggttcagtcagagaag
ctgcagcgaggggggaaggtgatgcgaaacgccatcctctccagagcaccccacatgatc
agagaccggaagtaccacctcaagacatacaggcagtgttgcgtaggtacagagctggta
gactggctggtgcaacagagtacctgtgtacacactcgctctcatgctgtagggatgtgg
caggctctgctggaggagggagtactgaaccacgtggaccaagagctgggtttccaggac
aagtacctgttttaccgtttccttgacgacgaggaggaggacaccccgttgcctagcgag
gaggagaagagagagagtgaggaagagcttcctgagaccatcctcttccttgcccagata
ggacctgacgccctgctgcgcatgatcctccgcaaacctcctggtcagaggacaggtgat
gatttggagatcatctatgatgagacttgcttcacatcagtcttatcccacctctccaac
actgtgaagagggagctggccagtgttctgatatttgagtcccacgccaaagcaggaacc
gtgttgtttaaccagggtgaggagggcacatcctggtacatcatccaaaagggctctgtc
aatgtggtcatctacggcaagggtgtggtgtgtaccctgcacgagggagatgactttggg
aagctggcgctggtgacggactctgctcgagctgcctccatcgtcctcagagaagacaac
tgccacttcctccgagtggacaaggaagacttcaacaggatactcagggacgtggaggcg
aatacagtgcgcctgaaggagcatgagcaggctgtgctggtcctggagaagagtcccaga
gcctctactctgggaaacatcaagtacactgtgatgtctggaacccctgagaagatccta
gaccacttcctggagaccatgaggatggacacacaccacgctgacccagatcctgcggta
gatgactttgtyctcatgcactgtgtcttcatgcctaacagccagttctgccaactgctc
atggcacactaccatgcggtggctcccccgggttcggagcaggagaggttggagtacgct
gttacctctaaaagacgagtcctcaatctggccctccgctgggctgcagtacacacacac
catctacaggaggagcaagcagcactcacattcctggaggagctgtatgggagtgtgtcc
aatgactcacggatcctcagagctctgaaagactttgtacccgacttggagaaggtcgtc
aaactacattcagaagaggccaaattgaaaaagcagaaggtccttcttagagagttcagc
aacggagacgagagactagcgaagaaacaacccatcaggaactgtgacgaaatcctattg
aaggtgtactgcagtgaccatacctataccaccatccgggttgccgtggcagccacaggg
agagaggtgaccagtgctgtggctgacaaactggcctcaaacgatgacctgctattggtc
cacctcagctccgcaggcgagaagcagatgctgaggcccaatgatgtgtccgtattctcc
actctgagcaccaacgggcgtatgttcgcctgtcccagggaccagctgaatgctctgacc
cctctcccagaccaggaggggccctcagcggggtccatgtccagttttgagctgatgagt
tctaaagacctggcctaccagatgaccctgtacgactgggaactcttcagctgcgtgcac
gagcatgagctgttgtaccacacctttggccgtcagagcttcaggagaaccaccgccaac
ctggacctcttcttacgcaggttcaaccaggtgcagctgtgggttgtgaccgaggtgtgt
ctgtgtggtcagctcagcaaacgggttcagctgctcaagaagttcatcaagatcgctgct
cactgccgggagtttaagaatctgaactcgttctttgccatcatcatgggtatgagcaac
cctgcagtcagccgactcgcccagacctgggagaaactccccagcaagttcaagaagttc
tacgctgaatttgaaagcatgatggacccatccaggaaccaccgggcctaccggctgacc
gtcaccaaaatcgagccgccaatcatccccttcatgcccctcctcctcaaagacatgact
ttcagtcacgagggcaacaagacattcatagacaacatggtcaactttgagaagatgcgg
atgattgcaaacaccatccgggcagtgagacactgcaggagtcagccgttcaaccctgag
gtgtgtcagcccaataagaaccatgcggaggtgaggggttacgtcagaaagctgtgtgtg
attgacaaccagcggaccctgacaacgctctcctataggctagagccccgcaggacctga
DBGET
integrated database retrieval system
