Salvelinus sp. IW2-2015 (Arctic char): 111980694
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Entry
111980694 CDS
T05762
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00514
Other types of O-glycan biosynthesis
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
111980694
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111980694
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111980694
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
111980694
Glycosyltransferases [BR:
salp01003
]
Glycan extension
O-Glycan
111980694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
111980694
NCBI-ProteinID:
XP_023867337
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Position
LG20:complement(6146511..6154704)
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AA seq
380 aa
AA seq
DB search
MSKSYGKKTVVSITSAVFTCLMLLLVVAQHQRVQVDEVPNQREMGTRSLQSMDTVATDGV
KADQQQVNSEAQAKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKIGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNMRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIXES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttatggtaagaaaacggttgtttctataaccagtgcagtattcacctgc
cttatgttgctcttggtggtcgcgcagcatcaaagagttcaggtagacgaggttccaaac
cagagagagatggggacgcgctcactccagagcatggacaccgtggctacggacggagtg
aaggctgatcagcaacaggtcaactcggaggcgcaggcgaaaaaaggattctctgcgtat
ttttcgaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacagatgcgtcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagacggagaagatgaggagctgaagaagaaaatt
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttttgtcacgtg
gatgatgataactacgttaacatgaggactctygtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgcgaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcatrgagtcg
gtgctgggggtgcctctgacccgcagcaacttcttccactcccatctggagaacctgcaa
caggtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttcccagtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgcccgcttcaggttgcctac
tag
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