Salvelinus sp. IW2-2015 (Arctic char): 111980820
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Entry
111980820 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111980820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111980820
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111980820
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111980820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
Motif
Other DBs
NCBI-GeneID:
111980820
NCBI-ProteinID:
XP_023867592
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All DBs
Position
LG20:complement(38234531..38267176)
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AA seq
979 aa
AA seq
DB search
MRRYWIEISPNFLHLKKTELAEMDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFS
CIRRWLTEQRAQCPHCRAPLQLRELVNCRWVEEVTQQLDTLQLCNLSKHEENDKDKCENH
HEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELI
SLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLLTLMGQKTSLTQETELL
ESLLQEVEHQLRSCSKSELISKSPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDS
STFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPET
SKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLV
LRYQVRSPTFFQKCRDQYWYISQLESAQSSYIQQINNLKERLAIELICRQQSRSSSPPNR
RLGPSTSERDSRSGKGPVAEDSCQTTETKEEEEEEEEKTQHDDSNELSDGDLEVDCLTGD
EEVNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEFSRNLEMEEGELPADVAGAAGS
SNPGARCLRRSGGLSSAGSNNSLLEIDPVILIQLLDLKERSSVESLWGLQPRPPASLLHS
QVQVHSRKERGERRPQTVRRGAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGETKAGPS
GRATGVEQGPSYHSELGPSRKPIELDLMGKGPGVSRHCRSGGKKASSPKQDGSRLGLRRA
ADVVEKELRGQSGGESSSDQSLFPRGTSNGSEGALKPRSAHSSPPYLGSSSSCSENKPCS
SKHDQEQLYGSDLYALEFLSGISTATMTRSRTKPIGAGLLTDSSLDCDSEPAEIRQSLLS
LAEEPSSCPNEGHVVQKRTVVLLPGMSSDSEIDCDTENEDEVVVLETGDCRYDTPALPCA
GDQLISDDLSFTTGETTER
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtattggattgagatttcaccgaatttcctccacttgaagaaaactgaacta
gctgagatggatgaacaaagtgttgagagtattgcggaggtgtttcgttgtttcatctgt
atggagaagctgagggacgctcggctctgcccccactgctccaaactctgctgtttcagc
tgcatacggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactg
cagctgcgggagctggtgaactgccgttgggttgaggaagttactcagcagctggacacc
ctgcagctctgcaacctctccaaacacgaggagaacgacaaggacaagtgtgagaaccac
catgagaagctcagtgtgttctgctggacctgtaagaagtgcatctgccaccagtgtgct
ctgtggggaggcatgcatggcggccacaccttcaagcctctggctgagatctatgagcag
cacgtgaccaaggtgaacgaggaggtggccaagctccgccgacgcctcatggaacttatc
agcctggtgcaggaagtggagaggaatgtggaagcagtgcgaggggccaaggacgagcga
gtgcgagagatccgtaatgcagtggagatgatgatcgcccgtctggacaaccagctcaag
aacaaactcctcaccctcatgggtcagaagacctccctcacccaggagactgagctactg
gagtctctcctacaagaggtggaacatcagctgcgctcctgcagtaagagcgagttgatc
tccaagagcccagagatcctgctcatgttccagcaggttcaccgcaagcccatgcagtcg
tttgttaccaccccagtccccccagacttcaccagtgagctggttcctgcctatgactca
agcactttcgttctggcaaacttcagcaccctgagacagagggcagatcctgtctacagc
ccaccactccagatatctggcctctgctggagactcaaggtttacccagatggcaacggt
gtggtgcgtggcaattacctgtcagttttcttggaactgtctgcaggactccctgaaacg
tcgaagtacgagtaccgcgtggagatggtccaccaggcctctagcgaccccactaagaac
atcatcagggagtttgcatcagactttgaggtgggggagtgctggggatacaaccgcttc
ttcagactggacctgctggccagtgagggctacctcaacatgcagactgacactctagtc
ctcaggtaccaggtgcgttcgcccaccttcttccagaagtgcagagaccaatactggtac
atcagccagctggagtcagcccagtccagctacatccagcagatcaacaatctcaaagag
aggctggccattgagctgatctgtaggcagcagtctcgcagctcgtcccctcctaaccgg
cgcctgggcccctcgacctcggagagagactcacgctcagggaaaggcccagtagctgag
gacagctgccagaccactgagaccaaagaggaagaggaggaggaggaagagaagactcag
cacgatgactccaatgagctgtctgacggggatttggaggtggactgtctgacgggggat
gaggaggtgaaccctcttgacggcagcagcacctctggcagctccacggcaaccagcaac
accgaggagaacgacatcgacgaggagaccatgtctggggagaatgacgtggagttcagt
aggaacctggagatggaggagggagaactgcctgccgatgtggcaggagcagcaggaagc
tctaaccccggggccaggtgtctgaggcgtagtggtggtctctcctccgctggcagcaac
aacagtttgctagaaatcgaccccgtcatcctcatccagctactggatctgaaggagcgc
agcagtgtggagtcactgtggggccttcaacccagaccccctgcctccctgctgcacagc
caagtccaagtccactccaggaaggagcggggtgagcgcaggcctcagacagtgcggcgg
ggagccccagactctggggtcctgattcggctcaaggcacagatggccgaggtgcgcagt
aagatgtcggatgtcaagtgtcagctggaggcacggggggagaccaaggcagggccctcc
ggcagggccacaggggtggagcaggggccctcttaccactcagagctagggcccagcagg
aagcccatagagctagatctgatggggaaaggacccggggtctccagacactgtcgctct
ggagggaagaaggcctcatctcccaagcaggatgggagcaggctgggcctaaggagggct
gcagacgtagttgagaaggagctgagaggccagagcggtggagagtcgtccagcgaccaa
agcctctttcccaggggcacctccaacggatcagagggagccctgaagccacgcagcgcc
cacagctcccctccctacctgggcagctcgtcgtcctgctccgaaaacaaaccctgcagc
tccaaacacgaccaggagcagctctatgggtccgacctgtacgctctggagttcctcagc
ggcatctccaccgccaccatgacacgatccaggaccaaacccataggggccggcctgctg
acggacagctctctggactgtgactcggagccggctgagatccgccagtcactgctctcc
ctggcagaggaaccctcttcatgccccaacgaaggtcatgttgtccagaagcggacggtg
gtactgctgccaggtatgagtagtgatagtgagatcgactgtgacacagagaacgaggac
gaggtggtggtcctggagactggagattgtcgctacgacaccccggcactgccctgcgca
ggggaccagttgatctctgatgacctaagcttcaccacaggagagaccacagagaggtga
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