Salvelinus sp. IW2-2015 (Arctic char): 111981523
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Entry
111981523 CDS
T05762
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111981523
Peptidases and inhibitors [BR:
salp01002
]
Metallo peptidases
Family M10
111981523
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
DUF4953
EarP
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
111981523
NCBI-ProteinID:
XP_023868586
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Position
LG20:45055682..45094296
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AA seq
473 aa
AA seq
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MKTFNLCLLLVNLAIVVYSLPISPPTEEDEALAETYLKKFFNLTEETGPMFRRGPSQRSR
KVSEMQRFFGLKVTGTLDAETVKMMKKPRCGLPDVQLGRFTTFDNLKWPTNQLTYRIENY
TPDMSVAEVDNSIERALQVWAKVSPLRFTRIYRGTADIMISFGNRNHGDFYPFDGPDGTL
AHAFSPGADIGGDAHFDDDEYFTFSSTRGYNLFLVAAHEFGHSLGLSHSNDPGALMFPVY
SYTEPSTFSLPRDDVTGIQYIYGPNPDVNPNPDKPDPTPASTPDACDPTLVLDAVTTLRG
EKMFFKGRFFWRIYPQSSKPHQNLIKTFWPELPDNINAAYESQLSDRVFLFKDRQVWALY
GYNIAPGYPRNLKSLGLPRTVKKVDAALYDEHSRKTLFFVGDNYYSYDEEMKSMDRGFPK
RVDEQFPGMTSKVTAAFQVRGFTYLYSGPYVFEYSMRTRRQFRVLGNNYFLPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcaatctgtgcttactactagtcaacctggcaatagtggtttactctttg
ccaatwtcgccacctactgaagaagatgaagcccttgcagagacgtacctgaagaagttc
tttaacctgacggaggagacgggtccaatgttcagacgggggcccagccagcggagcagg
aaagtcagcgagatgcagaggttctttggcctcaaggtgacaggaaccttggacgctgag
accgtaaagatgatgaagaagccacgctgcgggttacctgacgtccaactcggccgattc
accaccttcgataaccttaagtggccgacaaaccagcttacctacagaattgagaactac
actcctgacatgtctgtggctgaggtggacaactccatagagagagcactacaggtgtgg
gccaaggtctcccccctaaggttcacccgtatctaccgcggcaccgctgacatcatgatc
tccttcggcaacagaaatcatggtgatttctaccccttcgatggccctgatggcaccctg
gcccatgccttctcccccggcgctgacattggaggagatgctcattttgatgatgacgag
tacttcaccttcagctcaaccagagggtacaacctgttcttggtggctgcccatgagttt
ggccattccctgggtctcagccactccaacgaccctggagcgctgatgttcccagtgtac
agctacacagagcccagcaccttctctctgcctcgtgatgatgtcaccggtatccagtac
atatacggcccaaacccagatgttaaccccaacccagataagcccgaccctacacctgct
tccacccctgatgcctgtgaccccaccctggtcctggatgctgtcaccactctgcgtggg
gagaagatgttcttcaagggcaggttcttctggcgtatttaccctcagagcagcaaacca
catcagaacctcatcaagactttctggcctgaactccccgacaacatcaatgctgcttat
gagagccagctatctgacagagtgttcctctttaaagatcgtcaggtctgggctctctat
ggctataacatcgcccccggctatcccagaaacctgaagagcttgggtctgcccaggacc
gtgaagaaagttgacgccgccctgtacgatgaacattctcgcaagaccttgttctttgtt
ggcgacaactactacagttacgatgaggaaatgaaaagcatggacagaggtttccccaag
cgtgtggatgaacagttcccaggcatgacaagcaaagtgactgcagccttccaagtccga
ggcttcacctacctctatagtggcccctacgtgtttgaatacagcatgaggaccagaagg
cagttccgcgtgctaggaaacaactacttcctgccttgttag
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