Salvelinus sp. IW2-2015 (Arctic char): 111981758
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Entry
111981758 CDS
T05762
Name
(RefSeq) plakophilin-2
KO
K12642
plakophilin 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04382
Cornified envelope formation
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111981758
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111981758
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Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
ARM_ARMC5
ARM_PUB
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
111981758
NCBI-ProteinID:
XP_023868946
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Position
LG3:1307690..1321508
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AA seq
795 aa
AA seq
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MEAPQFMKSVLPALDSFTLDADDTSLALPPEDNTKTHSTDRGFRVQQQVQLTLARKGKKT
TSNGSLHLSRKPSIITGSRDGTLNNMKTHSPLSQIGGRDFSSLSSLKENIRSPPKRVDLT
PVTSPELPHSHLAYRTLRFGTYTLPGPSQPXMMGTSVERSYGTDLMRRYAHSEVARSTRT
HAMANGGNYHWGQSLRQTRGPQPLSADHSFLCSSPAIRTDNSPYLMEVQKGARRQTGYGS
FNATQRTEGLAWLGQVGKESQGHVGAKWPPSYPASLVSMEVDMGQMRAAAEPEIQQTDVN
EVTAVKPESKVPELTLERAVNLLGQENEEMQITAASFIQNQCFNSADAKKMVFYLHGIPX
LIKLLQSDSEELERIAAGALRNVVFESSENKMEVKDNEGVAPTLRLLRRSRDIETRRQLT
GLLWNLSSHDLLKEHLSKEALEILTTSVLVPCSGLFEGENPKDGMLADPDTFYNATGCLR
NISSAGPEGRKAMRQCENLIDSLVYYIRGTIADYKPDDKSTENCVCILHNLSYQMEVELP
QNYASELHESRLNLNPKTKTPGCFGSRSAKIIQRLEPKRPLLEEKGSPCGIEWLWSAITV
RMYLSIMARSIRPYTQETAIGALQNITAGNGLVSQAIAHTIVQRENGLLQAMKMLQEGGM
DVKKTAVSLLCNISRYRELHAHIVKQVLPQLVVMLPNSDTSXDLPTEVTVSLCHILINLS
QDETQHVRAIVNHGALPKIINISAKDNGFGPTRAGQAACILLHSMWSHSELHRAYRKAGY
RKADFVNSRTSKAVH
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccgcaatttatgaagtcagttttacctgcactagactcattcacacttgac
gcagatgacacgagtttggcattaccaccggaggataatacaaagactcattcaaccgac
cggggttttcgtgttcagcaacaagtgcagctcacacttgctcgtaagggcaaaaagaca
acgtccaatggtagtcttcatctatccagaaagccatcaattatcaccggttccagagat
ggaaccttgaataacatgaagacacactcacctttgagccagatcggaggcagggacttc
agcagcctgtcgtctttgaaggagaatataagaagtccacctaagagggtggatttgacc
ccagtcaccagccctgagttacctcactcccatctggcttacaggacactccgtttcgga
acctacactctacccggccctagccagccgrccatgatggggacttcagtggagcggtcg
tatgggacagacttgatgcgacgttatgcccattcggaagtggcccgtagcacaaggacg
cacgccatggctaacggcggcaactaccactggggccagtccctcagacagactcgaggt
cctcagcccctctctgcagaccactcattcctgtgcagcagccctgcgattcgcaccgac
aacagcccctacctgatggaggttcaaaagggggcgaggagacaaacaggctatgggtca
ttcaatgctacccagagaacagagggcctggcctggctgggccaggtggggaaggagagc
caggggcatgtgggagccaaatggcctccctcgtacccagcctcactggtcagcatggag
gtggacatgggccagatgagggcggcggcggagccagagatccagcagacagacgtaaat
gaagtcaccgcggtgaagccagagagcaaggtgcctgagctgacattggagagggcagtg
aacctgctgggccaagagaatgaggagatgcagatcactgctgccagctttattcaaaac
caatgtttcaacagcgctgacgctaagaagatggtgttctacctccacggtatacccayg
ctgatcaaactgctgcagagcgacagcgaggagctggagcgcatagcggcgggggcgctc
cgaaacgtcgtcttcgagagcagcgagaacaagatggaggtgaaggacaacgagggcgtg
gcccctacactgcgtctgctcaggagaagtcgcgacatagagacccggcggcagctcact
gggctgttgtggaacctatcctcccatgacctgctgaaggagcatctctccaaagaggcc
ctggagatcctgaccacgtctgtgctggtgccctgctcaggcctgtttgagggggagaac
cccaaagatggcatgctggctgacccagacaccttttacaacgccactggctgcctccga
aacataagctcggctggtccagaagggagaaaagccatgcggcagtgtgagaaccttatt
gactcacttgtatactacatccgcgggaccatagctgactacaagcccgatgacaagtcc
acagagaactgtgtgtgcatcctacataacctctcctaccagatggaggtggaacttcca
cagaactacgccagcgagctccatgagtctcgactcaacctgaatccaaagaccaagacc
cccggctgtttcggttctcgcagtgccaaaatcatccagcgtcttgaaccaaagcgccct
ctgctggaggagaagggtagtccatgtggaatagagtggctgtggagcgccatcacagtg
cgcatgtacctgtcaatcatggcccgcagcatccgtccctacacccaggagactgccatc
ggagccctgcagaacatcacagctgggaacggcctggtatcccaggccatcgcccacacc
atagtacagcgggagaatggtttactccaggccatgaagatgctccaggaaggagggatg
gatgtgaagaagactgctgtgtccctgctatgtaacatctcacgctacagagagcttcac
gctcacattgtcaaacaggtgttgccacagctggtggtcatgttacccaactcggacacg
agcycagacctgcctacagaggtgactgtgtccctgtgccacatcctcatcaacctgagc
caggatgaaacgcagcacgtcagggccatcgtcaaccacggggcgctgcccaagatcatc
aacatcagcgcaaaggacaacgggtttggtcccaccagggctggccaggcagcctgcatc
ctactacacagtatgtggagccactcagagctccacagggcctataggaaggctggatat
aggaaagcagacttcgtcaacagcaggacatcaaaggctgtacattaa
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