Salvelinus sp. IW2-2015 (Arctic char): 112070165
Help
Entry
112070165 CDS
T05762
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112070165
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112070165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
DUF898
DUF2516
DUF16
Motif
Other DBs
NCBI-GeneID:
112070165
NCBI-ProteinID:
XP_023993345
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MTHRSLYFNESDSTKRCSTEXDSDRNHPLLKTVSCANRSANSHGHYKRWINEDRHTMLRQ
TLAKTRRLGMRGPAYMFSARSASLSLTEERFLDAAEYGNIPGVRKMLEELPELNVNCVDY
MGQNALQLAVANEHLEVTELLLNKDNLARIGDALLLAISKGYIRIVEAILSHRSFADTQR
LVNSPGQAETQDDFFSYDEDGTRFSHDITPIILASHCHEYEVVHILLRKDARIERPHDYL
CKCGTCSYHQKHDSFSHSRSRINAYKGLASPAYMSLSSKDPVMAALELSNELAVLANIEK
EFKKDYKELSVQCEDFVVGLLDLCRNTEEVEAILNGDIDASENYEPHGRPSFIRLKLAIK
YELKKFIAHPNCQQQLMSIWYENLSGLRQQTNVVKFLVVLGVAVGLPVLALLYWVAPTSK
LRGVVLYGHVREQFGTLEAIRCIHHQQAQEDGEGSCMGHDFRKGRTDYLPQLRRREKMNS
SPYGTQRPEDSLEVDEIFMAFWHAYAAQSYVNKHFTNLSNITLVPEIEYYRLARNNWVPS
DPQIISEGLYSIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFM
FGMFNLYSYYLGAKQNDAFTTIEESFKTLFWAIFGLSEVKSVKINNGHKFIENIGYILYG
VYNVTMVIVLLNMLIAMINNSFQEIELDHPKNSTAGGLACPSRHQKIMRRLIKRYVIQAQ
INKDSDEVNEGELKEIKHDISSLRYELLEQKNHNMEELAELIRRLGEKIPAEQQRHQGQI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgactcacagaagtctgtatttcaatgaaagtgattcaacaaaacgttgttctaccgaa
rgagattctgatagaaatcatccactgttgaagacagtctcatgtgctaacagaagcgcg
aacagccacggacactacaagagatggatcaatgaggaccgtcacaccatgctacgacag
acgctggccaagacacggaggctgggcatgcgggggccggcctacatgttcagcgcccgc
tcagccagcctatccctgaccgaggagcgcttcctggacgcggcggagtacggcaacatc
cccggggtccgcaagatgctggaggaacttcctgaactcaacgtcaactgtgtggactac
atgggccagaatgcattacagctggcggtggccaatgagcatctagaggttacggagctg
ttactgaataaggataatctggccaggataggggatgctcttctgttggctatcagtaaa
ggatacattaggatagtggaggctatattgagtcacaggtccttcgcagatacacagagg
ctcgtcaacagtcctggccaagcagagacacaagacgacttcttctcctatgacgaggat
ggtacacggttctctcatgacatcacccccatcatcctggcctctcactgccatgagtac
gaggtagtacacatcctcctgaggaaggacgcccgtatcgagcgaccacacgactacctc
tgtaagtgtggcacctgcagctaccaccagaagcatgactcgttcagccactctcggtcc
cgtatcaatgcctataaagggctggccagcccggcctacatgtctctctctagcaaagac
cctgtgatggctgccctggagctgagcaacgagctggctgtcctggctaacatcgagaag
gagtttaagaaagattacaaggaactgtccgtgcaatgtgaagactttgtggtcggactg
ctggacctgtgccgtaacacggaggaggtggaggccatcttgaatggggacattgatgcc
agtgaaaactatgagccacatggaagaccaagctttataagactaaagctcgcaataaaa
tatgaactgaagaagttcatagcccatccaaactgccagcagcaactcatgtctatctgg
tacgagaacctgtctggactgagacagcagaccaacgttgtcaagtttctggtagttctg
ggtgtagctgttggactgcctgtcctggctctgctctactgggtggcaccgactagcaag
ctgagaggggtggtcctgtacggtcatgttagggagcagtttggtaccctggaagcgatc
cgctgcattcatcaccagcaggcccaggaagatggtgaaggaagctgcatgggccacgac
ttcaggaagggacgcacggattatcttccccagctgagaagaagagagaagatgaatagt
agcccctatggaacccagagaccagaggacagccttgaggtagatgaaatatttatggcg
ttctggcatgcgtatgcagcacagagctacgtcaacaagcactttaccaacctgtccaac
attaccctggtcccagagatagaatactacagactggcccgtaataactgggttccctcg
gacccccagatcatctcagagggtctgtattccatcgctgtggtactgagcttctctcgc
atcgcctacatcctcccagccaatgagagtttcgggcccctgcagatatctctgggacgc
acggtgaaagatatcttcaagtttatggtgatcttcatcatggtttttgtggccttcatg
tttggaatgttcaatctctactcctactacctgggagccaagcagaacgacgccttcacc
acaattgaggaaagcttcaagacgttattctgggccatatttggcctgtccgaagtcaag
tcagtgaagatcaacaatggccataagtttatcgagaatatcggctatatcctttatggg
gtttataacgtcaccatggtgatcgtcctgctcaacatgctcattgccatgatcaataac
tccttccaggaaatagagttggatcatcctaagaattcaactgctggaggtctggcttgt
ccgagtcggcaccagaagataatgagacgcctcatcaagagatatgtgatacaagcacag
atcaataaagacagtgacgaagtgaatgaaggagagctgaaggagattaaacatgacatc
tctagtttacgctacgaactcctggagcagaagaaccacaatatggaggagttagctgag
ctgatcaggagactgggagagaagatacctgccgagcaacagaggcatcagggtcagata
tag
DBGET
integrated database retrieval system
