Salvelinus sp. IW2-2015 (Arctic char): 112070308
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Entry
112070308 CDS
T05762
Name
(RefSeq) TNF receptor-associated factor 5-like
KO
K09849
TNF receptor-associated factor 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04217
Necroptosis
salp04621
NOD-like receptor signaling pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112070308
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112070308
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112070308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112070308
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
112070308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
EzrA
ATG16
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
NPV_P10
DUF948
Spt20_SEP
CorA
Motif
Other DBs
NCBI-GeneID:
112070308
NCBI-ProteinID:
XP_023993491
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MATEESDPSGSGGLSRQNSGVAGPWESDLTAVQHSLKFVKKLEEHYVCPTCKGVVLNPHQ
TGCGHIFCYRCIQGLLENSPATTPACPLDRGLIKSDEVFQDNCCKREISNLEVYCTNSPN
CSHRMTLCRLQEHLQACQFESLQCSNAGCSEIMQRKDLQEHLKISCSYRMEPCHYCKHPY
TCCQLEDHERHSCPEVEIKCPNKCSQMIKRCMLEDHADQCPEVQTDCVFKKYGCFVRERR
AQVQVHEETALNDHILLVLGSNTKLETQMAILQQEVLLRHKELQERSRQVSGLEKEVRPL
AQQVSRCDNTLSAVQRSLEEQRDHISSVQLQLEELSSVFGPGVAREELGQIRASLDALRQ
QVSVTEGLKDHLGELKETYMRHSRLLSIHTAQLECNEEHFRELESTSYDGKLIWKLRDYR
KRKEAGSQGQGPCLSSAPFHTGRSGYKMAARAYLNGDGAGRDTHLSLYVVLMRGDFDPLL
PWPFRQPVSLSVLDQSGTNNHLTMSFKPDPENTSFHRPGSAAATSTAPTNVASGFQCFAS
HAQLETPKNAIYVRDDTLFVKVKVDTSGLEDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaggagagtgacccgagtggatccggaggactctccaggcagaattcggga
gtggcgggaccgtgggaatcggacttgactgcagtgcagcacagtttgaagtttgtgaag
aagctggaagagcactatgtttgtcccacctgtaaaggagtagttctcaacccacaccaa
actggctgcggacacatcttctgctaccgctgcatacaaggactcctggaaaactcccca
gccaccacccctgcctgtcctttggacagaggtttgatcaaatctgatgaggttttccaa
gacaattgctgcaaaagggagatctcaaatttagaagtttactgcacaaactcccccaac
tgctcccacagaatgacattatgtcggttgcaggagcatctacaggcatgtcagtttgag
tcattgcagtgttccaatgcaggctgcagtgagatcatgcaacgtaaggacctgcaggag
cacctcaaaatcagctgctcctatcgtatggagccctgtcactactgcaagcatccttac
acatgctgccaactcgaggatcatgagaggcattcatgcccagaggttgaaatcaagtgc
cccaacaaatgctcccagatgattaaaagatgcatgcttgaagaccatgctgaccagtgt
cctgaggtgcagacggactgtgtttttaagaaatacggctgctttgtccgggagaggaga
gcccaagttcaagtccatgaggaaaccgctctcaatgaccatatcctcctggttctgggg
agcaacaccaagctggagacacagatggcaatcctccagcaggaggtgctgctgaggcac
aaggagctccaggagaggagccgccaggtcagcggtctggagaaggaggtccgcccactg
gcccagcaggtcagccgatgtgacaacaccctgtctgcagtacagaggtctctggaggag
cagagggatcacatctccagcgtccagctccagctcgaggagctgtccagtgtgtttggc
cctggtgtggcccgggaggaactgggccaaatcagagcgtccctggacgccctcagacag
caggtgtccgtcacggaggggctcaaagaccacctgggggagttgaaggagacctacatg
cgccactcgcgcctcctcagcatccatacggcgcagctggagtgtaacgaggagcacttc
agagagctcgagtccacctcatacgacggcaagctcatctggaagctccgcgactaccgc
aagaggaaggaggccgggtctcaaggccagggaccgtgcctgagcagcgcgcccttccac
acgggccgcagtggctacaaaatggccgccagggcctacctgaacggtgacggggccggc
cgggacacccacctgtctctctacgtggtcctcatgaggggtgacttcgaccccctcttg
ccctggcccttcagacagcctgtgtcattgtcagtgctggaccagagcggcaccaacaac
cacctgactatgagtttcaaacccgacccggaaaacactagcttccaccggcccggctcg
gccgctgcaacctccaccgcccccaccaacgtggcctctggtttccagtgctttgcctcg
catgcccagctggagacacctaagaacgccatatacgtgagagacgatacgctctttgtt
aaggtcaaagtagacacgagtggtttggaggacttgtag
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