Salvelinus sp. IW2-2015 (Arctic char): 112070488
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Entry
112070488 CDS
T05762
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112070488
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Protocadherins
112070488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
112070488
NCBI-ProteinID:
XP_023993665
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MESRQRKHCGGWPVLRLWFSLACLMSATAQLSYSVSEELRPGAVVGNIAKDLGLTVQMII
KRKLRVVSESNAQYFEVNQATGDFIIRQTIDREHMCELSXTCSLHXEIVLEXPLAIHRVL
VDIVDVNDNAPQFSTKNISLEISEAAAXGTXFRLESAHEPDVGINSLRTYHLAANDRFVL
NVETKSDGSKFPELVLEKALDRETQASFRLLLTALDGGQPEKSGSTLLLITILDVNDNAP
VFDKSMKKVSVLENVEKGTLVTKLNATDADYAQNGEISFLFSKYTPDRVLKLFSVDSKTG
EVRVNGHVDYETANEYYVTVLARDGGTPAMEASCNIKVEVTDVKDNSPEVMLTSLTSPIQ
EDAAPGTVIALISARDLDSGKNGKVTLKVQSGLPFKLNSAFGEHYNLITDGNLDRETMAD
YTVVIMATDAGSPPLSSRTTFVVKLSDVNDNAPSFSQPSYSVDVPENNAPSTPIAMVMAS
DPDIGDNARVSFSILPSMVQGSPISSYIYINPETGHIYSMRSLDHETLNAFRIEVQARDA
GAPPRTTNVTVHVFVVDLNDNAPLIVYPPFPQDTGLQLSVPQSAGPGHLINKLVGVDPDS
GHNAWLFYSIAPGPHAALFLITPHTGELRTTRKLAEEEGGSAYDIIVVVQDNGEPILSTT
VAITVTVEEKGASDAAIDNRKTSLMRQTGMSDITLYLIISLACVSAVSFLTFFILMVRCL
RHRSDHGGTGCCYSHYRPSRAYHQRPNKDLHLQLNTDGPIRYMEVVGGAQDPPGTRTYRP
CYSTTSSRSDFMFVKTPMMSHNNTLSMTLNRKHLMNSANEQKPPNADWRFTQGQRPGPSG
AGGPPEMAMGTGPWPNPPTEAEQLQALMAAANEVSEATATLGPGTMGLSTRYSPQFTLQH
VPDYRQNVYIPGSTATLTSNPQQQQQQQMLMQQQMAAQQQALQAQPSEASAQPEPPKAAQ
TPASKKKSTKKEKK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagacagaggaagcactgcggagggtggcccgtgctgaggctatggttttcc
ctggcgtgcctcatgagcgcgaccgcccagcttagttactcggtgtcagaggagctcagg
ccgggggctgtggtcgggaatatcgctaaggatttgggtctcaccgttcaaatgataatt
aagagaaaattgcgggtggtctcggaatctaacgcgcagtacttcgaggtgaaccaggcg
actggggattttattattagacagacaattgacagggaacacatgtgcgaattaagtmca
acatgttcactacatstrgagattgtactrgagyaccctttagcaatacatcgmgttctt
gtggatattgtggatgtgaatgacaatgcgccgcagttttccactaagaatatttccttg
gagatatcagaggcggccgcgrcgggcacrcmgttccgactggagagtgcgcacgarcca
gatgtgggtatcaactctctgcgtacttatcacctcgcagccaacgaccgctttgttttg
aatgtggaaacgaaaagtgacgggagtaagttcccggagttagttttagagaaggctttg
gatagggagacgcaggcctcgtttcgcctgttgcttactgccctagacgggggacagcca
gagaagtctggctccactcttctactcattacaattctggacgtcaatgacaacgcgccc
gtctttgacaagtcgatgaaaaaagttagcgtgttggagaatgttgaaaagggcacttta
gtaacgaaactgaacgcgaccgacgcggattatgctcagaacggggagatctccttcctg
tttagtaaatacacgccggaccgggtgctcaagctattcagcgtagattcgaaaaccggt
gaggtccgtgtgaatggtcacgtggattatgagacagcgaatgagtattacgtcactgtg
ctggccagggatgggggaacccccgccatggaagcatcctgtaatatcaaagttgaagtc
actgacgtgaargataactctccggaggtgatgttgacgtcactgaccagtcctatccag
gaggacgcagcaccgggcacagttatcgccctcatcagcgcaagggacctggactctggt
aagaacggcaaggtaacattaaaggtccagtctggcctgcccttcaaactcaactccgcc
tttggagagcactacaacctcatcaccgatggcaacctggacagagagaccatggctgat
tacaccgtggtcatcatggcgaccgacgctggatcccctcccctgtcgtcgcgtacyacc
ttcgtggtcaagctgtcagatgtgaatgacaacgctccatcgttctcccagccctcctac
tcagtggacgtccccgagaacaacgcccccagcacccccatcgccatggtgatggcctct
gacccggacataggggacaatgcccgcgtctccttttccatcctgcccagcatggtccag
ggctcacccatctcctcctatatctacatcaacccagagactggccacatctacagcatg
cgctccctggaccatgaaaccctcaacgccttccgcattgaggtgcaggcccgagacgcc
ggggcgccaccccggaccaccaacgtcaccgtgcatgtgttcgtagtagatcttaacgac
aacgcgcccctcatcgtgtacccccccttcccccaggatacggggctgcagctcagtgta
ccgcagtcggctgggccagggcatctcattaataaactggttggggtggatcctgatagc
ggtcataacgcctggttgttctactccatcgcccccgggcctcacgctgctctattcctc
atcaccccccacaccggcgagctccgcaccactcgcaaactagccgaggaggagggtggc
tccgcctatgacatcatcgtggtcgtccaggacaacggcgaacctattctctccaccact
gtggccattacggtaaccgtggaggagaagggcgccagcgacgccgccatagacaaccgg
aagacgtcgttgatgcggcagactgggatgtctgacatcaccctgtacctcatcatctca
ctggcctgcgtctcggccgtgtccttcctcaccttcttcatcctcatggtccgatgcctc
cgccaccgcagcgaccatggagggacaggctgctgctacagccattaccggcccagcagg
gcctaccatcagaggcccaacaaggacctccacctgcagctcaacacagatggacccatc
cgttacatggaggtggtgggaggggctcaagaccccccaggaacacgaacctacagaccc
tgctactccaccacctccagccgcagtgactttatgtttgtcaagacacccatgatgagc
cataacaacacactcagtatgacgctcaacaggaagcacctaatgaactcagccaatgag
caaaagcctcctaacgccgactggcgcttcacccaaggccagagacctggacccagtggg
gctggaggccccccggaaatggccatgggaaccggaccctggcccaacccccccaccgag
gctgagcagctccaagccctgatggccgccgccaacgaagtgagcgaagcgaccgccacc
ctggggccgggcaccatgggwctaagcacccgttacagcccccagttcaccctgcagcac
gtgcccgactaccgtcagaacgtctacatccctggcagcacggccaccctgacctccaat
ccccagcagcagcagcaacagcagatgctgatgcagcagcagatggcagcccaacaacag
gccctgcaggcccagccctccgaggcctcggctcagcctgaaccccccaaggctgcccag
acccccgcctccaagaagaagtccaccaagaaggagaagaagtag
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