Salvelinus sp. IW2-2015 (Arctic char): 112070933
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Entry
112070933 CDS
T05762
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112070933 (rnf123)
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112070933 (rnf123)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112070933 (rnf123)
Multi subunit type E3
KPC complex
112070933 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112070933
NCBI-ProteinID:
XP_023994159
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MSSKGGGSTALTRRNYRLASDTDKPKVTGIVNEKLLSDYLHHVFPASHLPRPPLASLRKP
LGFQDLGAHLERLLTEGEPTEDTRDQPVDGCLGPLTVVLDHTSGFEGLLFVDDDLLGVIV
HSNFSSIRATTCVYRGKWAYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNR
VRKWNVTTTNYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGTAFSNIKMGPGVAYFPAI
SLSFKESVAFNFGSRPLRYPVEGYLPLQNPPTADLLRAHKLLGYIKTVLSTTLDTQEEKV
LVKDSACWSLHGEPTTLVTLAHIFNYFAPLMCKVYLVEGVLMNFLLGILEGGGSVDEHPL
IQQLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKS
RKYLLSNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTRFDKEGKESKDESAEER
LRRRAYERGCQRLKKRIEGLHPTALCPPEYMVCFLHRLITAVRSYWDEGKMKNPGCVSSD
EAYVPPQLFYNGKVDYFDLQRLGGLLSHLKKTLKDDLASKANILMDPAEIQATSMDDLDE
EEESGSAQRPFGAVAMGGALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKV
RTLAVEQRTEEDIEGSHGNDGLLLGRPLEEPDHPITEKSLLEILDGIVMMYNLSVHQQLG
KMVVVSDDVHEYAVALKDTEEKIARCPARRPDILEELLKSQKVFAEKLNHLSRRLAWINA
TIYCKDKMLDVYWLLRVCILTIQHADNTGTLFAFAPEFYLNVAMNSYSSLKNYFSPSNCM
DQLPGYEDTLTQLAAILAKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQR
VSMMRNLLAPYEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDTNLPSLQKPCP
SLLLQRHMAELLSLDKDMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQ
LKVCATCFDLSVSLLRVLEMTVTLVPQIFLDWTRPSAELLLRRLAQLLNQVLNRVTAERN
LFDRVVNLRLPGLESVDHYPILVAVTGILVRILVDCERQGVSRAASVLLSDPCFQLHSIQ
HLLGEGETSPAAAVLPQTPTVHPGDPAAAPAERKHFSLHAYTDYIHEEEEQKVEQMLAFL
TIESKQAAASTAPTSEEDLCPICYAHSISAVFKPCSHKSCKACINQHLMNNKDCFFCKAT
ITGVEDYSKPS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaaggggggaggaagcacagctctgacccgacgaaactacagactggcctcc
gacacagacaagcccaaagtcacaggtattgtgaatgagaaattactgagtgactaccta
caccatgtatttcctgcctctcaccttccacgccccccactggcttccctcaggaaacct
ctgggcttccaggacctgggggctcatctggagaggctgctaactgagggagagcctact
gaggacaccagagatcagccagttgatggttgtctaggtcctctgaccgtggtcctggat
cacaccagtggcttcgagggcctcctgtttgtggatgatgatctgctgggggtcatagtg
catagcaatttcagttccattagagctactacctgtgtatacagagggaaatgggcgtac
gaggtgctgatctcgtcacagggcctgatgcagataggatggtgcactctgaactgcagg
ttcaaccaggaggaaggtgtgggtgacactccagactcgtacgcttacgatggaaaccga
gtcaggaagtggaacgtaacgaccactaactatggcaagtcatgggcagctggagacata
gtgagctgtttgatagaccttgacgagggaaccatcacattctgtctgaatggccagtcc
ctgggcacggcgttcagtaacattaagatgggtccaggtgtagcctatttccctgctatc
agcctgtcctttaaagagtccgtggcgttcaacttcggcagtcgccccctcagataccct
gtagagggctacctgcccctccagaaccctccaactgcagacctgctcagggctcacaaa
ctactaggttatatcaagacagtcttgtctaccaccttagacacacaggaggagaaggtg
ctggtgaaagacagtgcctgctggagcctacatggagaacccaccactctagtgactctg
gcgcacatcttcaactactttgccccacttatgtgtaaggtgtatctagtagaaggtgtg
ctgatgaacttcctactgggtatactggaggggggaggctcagtggacgaacaccctctc
atccagcagcttctggacctcttctggcttctcatggaggactacgaggtgaacgagtgt
ctgaagcagctgatgatgtcactgctgagagcctatagattctcccccatcatcccagac
ttgggcttccagattcactaccttcgtttgacgacagctattctgcgccatgagaagtcc
aggaagtatctgctcagcaacgttctgtttgatgttttgcgctcagtggtgttcttctac
attaagactcctctgagggtgaaggaggcgggactagaggaactcatccccaccacctgg
tggcccacacgcttcgacaaagagggaaaggagtctaaagatgagagtgcagaggagagg
ctgaggcgccgggcctacgagagaggctgtcagaggcttaagaagaggatcgagggcctg
catcccacagcgctgtgtcctccagaatacatggtgtgttttctgcatcgtctcatcacg
gccgtaaggagctactgggacgaagggaagatgaagaaccctgggtgcgtcagcagcgac
gaggcctatgttccgcctcagctcttctacaatgggaaggtggactactttgacctgcag
cgacttggaggccttctctctcatctgaagaaaaccctcaaagatgacctggcctccaaa
gccaacatcctcatggacccagctgagatccaggctacctccatggatgatttggatgag
gaggaggagagtggctcagctcagaggccctttggagcggtggctatgggtggtgccctg
gccagacccagctggctcagttctcccactctgggccgagccaatcgtttcctgagtact
gctgctgtcagcctcatgactcccaggcgacccctggcacccccggagaaagttaaagtt
cgcaccctggccgtggagcagaggacagaggaggacatcgagggaagccatggtaacgat
ggcctgttgctggggcgaccgttggaagagcccgaccatccaatcacagagaagtctctg
ctggagattttggatgggattgtgatgatgtacaacctgagtgttcatcaacagctgggc
aagatggtggtggtgtcagatgatgtccatgaatacgctgtggctctgaaggacacggag
gagaagatagcacgctgtccagcaagaagaccagacatcttggaggagctgctgaagagt
cagaaggtatttgctgagaagctgaatcacctgagtagaagactggcctggatcaacgct
accatctactgtaaggataagatgctggatgtgtactggctactgagggtgtgtatactc
accatccagcacgctgacaacacaggaacgttgttcgccttcgccccagagttttacctc
aacgtagccatgaacagctacagctctctcaagaactacttcagcccctccaactgcatg
gaccaactgccaggctacgaggacaccctcactcaactcgctgctatcctcgctaagcac
tttgctgacccgcgcatcgttggaacagacatcaaagactccctcatgcaggctctggcc
agttacgtgtgttacccacaatccctcagagccgtggagaggatcccagaggaacaacgt
gtgtccatgatgagaaacctgctggccccgtatgaacagaggccctgggctcagactaac
tggatcctggtgcgcctgtggaggggttgtgggtttgggtacaggtacacacggctgcct
catctgctcaaaaccaaaccagaggataccaaccttcccagtctgcagaagccgtgcccg
tccctcctgctgcagagacacatggcggagctgctctctctggataaagacatggccgcc
tccttcctcaattctgttctcaaccagctcaactgggccttttcagagtttataggcatg
atccaggagattcagcaggcagctgaacgtcctgagcgtaactttgtggacacaaggcag
ctgaaggtgtgcgctacgtgtttcgacctttcggtcagcctgctgcgggtcctagagatg
acagtcaccctggtcccacagatcttcctcgactggacacgcccctccgctgaactgctg
ctcagacgattggctcagcttctgaaccaggtgttaaacagagtgaccgcagagaggaac
ctcttcgaccgtgtcgtcaacctgcgtctcccaggcctagagagcgtcgaccactatccc
atcctagtggctgtaacagggattctggtgagaatcctggtggactgtgagagacaaggg
gtgtcgcgtgcggcttcagtgctgttgtctgatccgtgctttcagctgcactccatccag
cacctcctgggggaaggagagacctctccggctgcagcagtgctcccccaaacccccaca
gtacacccaggagaccctgctgcagcacccgcagaacgtaaacacttctccctgcacgcc
tacacagactacatccacgaggaggaagagcagaaggtggaacagatgttagccttcctg
actatagagtccaagcaggccgcagccagtacagcacccaccagtgaggaagacctgtgt
cctatctgctatgcacactccatctctgctgtcttcaaaccctgctctcacaagtcctgc
aaagcgtgtataaatcagcacctgatgaacaacaaggattgtttcttctgcaaggccacc
atcactggagtggaggactacagcaagccatcttaa
DBGET
integrated database retrieval system
