Salvelinus sp. IW2-2015 (Arctic char): 112071953
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Entry
112071953 CDS
T05762
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112071953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112071953
04121 Ubiquitin system [BR:
salp04121
]
112071953
Membrane trafficking [BR:
salp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112071953
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112071953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Nup120_160
F-box-like
Beta-prop_DCAF4
Beta-prop_SPT8
ASA1
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_ACSF4
TRM82_WD
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
F-box
Ge1_WD40
CDtoxinA
WD40_RFWD3
Beta-prop_IFT140_2nd
KNTC1_N
PQQ_2
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
PALB2_WD40
Beta-prop_WDR19_2nd
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
112071953
NCBI-ProteinID:
XP_023995135
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MGFYGTLKMIFYKMKRKLDHGPEVRSFPSGKKPCKGSEYPSATGLVPYPATPTTFGHIRT
ANGQGQQRRRITSIPSPTGLQEWLRTFQTPLCAVSLLSLFYPSCGPLFIYVRSPGRYLAP
LHYFSTPLVTFTRSLASDIHNPSSSSPLRLVYGIHISCSSLLVDRVFLRSLTESLNEMAL
QLHRLTVQLQFVSGAHRGSCRLRHRLPSLSTVYLGLAEVADLSSLSCAPLTVHRLARGWS
VKGCDNLLSSFLSLXPSILPLFRQLALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE
KCREEGIDEPLAFKKRKITKPGFTHSPWKCAYIRQHRIDTNWRRGDLRSPKVLKGHDDHV
ITCLQFCGNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL
KVWNAETGDCIHTLYGHTSTVRCMHLHEKTVVSGSRDATLRVWNVETGQCLHVLMGHVAA
VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI
RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKH
QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLV
CAVGSRNGTEETKLLVLDFDVDMK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggtttctacggcactttaaagatgattttctataaaatgaagagaaagttggaccat
ggcccagaggtccgatctttcccttcaggaaaaaagccctgcaaaggctccgagtatcca
agtgctacagggctggtcccctacccagccacccccaccacgtttgggcacatcaggaca
gctaacggtcaggggcagcagaggcggcgtatcacctccatcccttctcccacaggtctc
caggaatggctccggacatttcagactcccctctgcgcagtctcccttctgtctcttttc
tatccctcctgcgggcctctcttcatctatgttcgtagccctggtcgctacctggcgccc
ttgcactacttttctaccccgctagtaaccttcactagatccctggcctctgatatccat
aacccttcatcctcctcgcctctgcgtcttgtctatggaatccacatttcctgctcctcc
cttcttgtcgaccgcgtcttcctccgtagtctcacagagtcccttaacgagatggctctt
cagctgcaccgcctcactgtacagctgcagtttgtgagcggagcgcaccgtggaagttgt
cgcctcaggcaccgtctcccttccctctccactgtgtaccttggtttagcagaggttgct
gacctcagcagcctgtcttgcgcccctctcactgttcaccgtttagccagaggctggagt
gtgaaagggtgtgataaccttctctcctcctttctctctctcrttccctccatccttcct
ctcttccgtcagttggccctgtacgtgctgtcgttccttgagcccaaggacctgctgcag
gccgctcagacctgtcgttactggcggatcctggctgaggacaacctcctctggagggag
aagtgccgggaggagggcattgatgagcctctagccttcaagaagaggaaaatcaccaag
ccgggcttcacccacagcccctggaagtgtgcgtacatcaggcagcataggatagacacc
aactggaggagaggagacctccgatcacccaaggtgcttaagggtcatgatgaccatgtc
atcacctgcctccagttctgtggtaaccgcatcgtcagcggctctgatgacaactcgctc
aaggtctggtcggctgtcacaggaaagtgtctgaggacgttggtgggccacacggggggc
gtgtggtcgtcccagatgagggacaacatcatcatcagcggctccaccgaccggacgctc
aaggtctggaacgcagagacgggcgactgtatccacaccctgtacgggcatacctcaacg
gtgcgctgtatgcacctgcacgagaaaacggtggtgagtggttctcgcgacgcracgctg
cgcgtgtggaacgtcgagacgggccagtgtttacacgtcctcatgggccacgtggcggcg
gtgcgctgcgtccagtacgacggccgcagggtggtcagcggggcctacgacttcatggtc
aaggtctgggaccccgagactgagacctgcctccacacgctgcagggccacaccaacaga
gtgtactcactacagtttgatgggatccacgtggtgagtggtagcctggacacgtctatc
cgggtgtgggatgtggagacgggtaactgcatccacactctgacaggtcaccagtccctc
accagcggcatggagctcaaagacaacatcctggtctcgggcaacgccgactccaccgtc
aagatctgggacatcaagacgggacagtgcctgcagacgttgcaaggtccccacaagcac
cagagcgccgtgacgtgcctgcagttcaacaagaactttgtcatcaccagctcggacgac
ggcacggtgaagctgtgggacctgaagacgggcgagttcatccgcaacctggtgacgctg
gagagcggcggcagcggcggggtggtgtggcgcatccgtgcctccaacaccaagctggtg
tgtgccgtgggaagccgcaacggcaccgaggagacaaaactactggtgctagactttgac
gtggacatgaagtga
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integrated database retrieval system
