Salvelinus sp. IW2-2015 (Arctic char): 112072990
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Entry
112072990 CDS
T05762
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
salp04110
Cell cycle
salp04114
Oocyte meiosis
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
salp04310
Wnt signaling pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112072990
04120 Ubiquitin mediated proteolysis
112072990
09124 Replication and repair
03420 Nucleotide excision repair
112072990
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112072990
04350 TGF-beta signaling pathway
112072990
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112072990
04114 Oocyte meiosis
112072990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112072990
03400 DNA repair and recombination proteins [BR:
salp03400
]
112072990
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
112072990
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112072990
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
112072990
Cul2 complex
112072990
Cul3 complex
112072990
Cul4 complex
112072990
Cul7 complex
112072990
Cul8 complex
112072990
Cul9 complex
112072990
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112072990
TCR (transcription coupled repair) factors
Cul4-CSA complex
112072990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112072990
NCBI-ProteinID:
XP_023996130
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgtcccctagacaacagggag
tgggagtttcagaaatatggacactag
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