Salvelinus sp. IW2-2015 (Arctic char): 112080586
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Entry
112080586 CDS
T05762
Name
(RefSeq) filamin-C-like
KO
K27393
filamin-C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112080586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
112080586
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112080586
Intermediate filaments
Intermediate filament-binding proteins
112080586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
Ig_GEX2_N
Big_3_5
Invasin_D3
Y_Y_Y
CFSR
CarboxypepD_reg
CH_2
Motif
Other DBs
NCBI-GeneID:
112080586
NCBI-ProteinID:
XP_024002153
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MMSNNTYYEQQQPPQYYQSTDNGDDEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKC
LNKRINDLQKDLTDGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVSVALEFLEREHI
KLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDXKKLTPKQRLLGWIQNK
VPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGVP
QVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRSKTLHPKMAKAYGPGIEPRGNMV
LKPAEFVVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRTYSVIYLPKVEGLHKVKV
LFAGQDIDRSPFVVSVSKAMGDPNKVQARGPGLEPVGNVANKPTYFDIYTAGAGAGDVGV
IIVDSQGRRDTVEIILENKGDSIFRCTYCPILEGSHVIYVTFAGQQIPRSPFTVHISEAS
NPNVCRASGRGLQPKGVRVKEVADFKVYTKGAGSGELKVTIKGPKGLEEPVKVRDAGEGV
YECDYYPIMTGKYTITITWGGQTIPRRTSSPLRNRVEEPVVTIGEGSHPENVKVYGPGVE
KSGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYMP
PGPGRYTIMVLFADHEIPISPFRIKVDPSHDANKVRAEGPGLNKTGVEVGKPTHFTIYTK
GAGKAKPEVHFTGAAKGDAVRDFEIIDNHDYSYTVRYTAVQQGNMSISICHGGDPIPRAP
STSLWPPLDINKKSTLEGSGVHSELRTGAVARQVDVTDHLALSSPIPCKLESDTATKSHC
EVHSPEEGPTKWTSAMMGTLCREPFTVEGVMPPDPQSLTPAVSQVRAYGPGLQGGMVGKP
APFAIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFAEQHI
PGSPFKAMVQSVFDPSKVTASGPGLERGKVNEAGSFVVDCAKAGDAELTIEIISDSGSKA
EVRVQNNSDGTYSITYIPQFHGMYTITIKYGGHAVPKFPARVQVDPAVDTSGLHIPTASV
LSTGVLREVTTHFIVDARAKSKTGGSHVKARIVNPSGANTDAYITDKGEGTYRVEYAAYE
DGIHLIEVLYDDVAVPNSPFRVPVTEGCDPSRVRAYGPGLEEGLVDKPNRFTVETRGAGT
GGLGLAIEGPSEAKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGLPIPGSPFRVPVREL
VDPSKVRCSGPGLGSGVRAHVPQTFTVDTSKAGLAPLGVVLYGPTGVAEPVNITDNGDGT
HTATYTPAKDGPYTVCVKYADQEVPRSPYKIKTLPAHDASKVXASGPGLNAQGVPASLPV
EFTIDARDAGEGLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMAGRYTITIKYGGDE
IPYSPYRIHALPTGDASKCLVTVSIGGHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTC
KVSTPDGAELDVDVVENSDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTVPI
IEEPCDKLQLQQPYQAYQGYPPHWATEEPVTPGDIMEPMLRPFNLVIPFTVQKGEITGEV
RMPSGKTARPNITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHV
TAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEINCKDNKDGTCTVSYLPTV
PGDYNIIVKFDNKHIAGSPYTAKIT
NT seq
5296 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaataatacgtactacgagcagcagcagccgccgcagtactaccagagtact
gacaacggggacgacgaggaagagatgccggctacggagaaggacctcgctgaggatgcg
ccctggaagaaaatccaacagaacaccttcaccaggtggtgcaacgagcacctcaagtgc
ctcaacaagcggatcaacgacctacagaaagacctgaccgacgggctcaagctcatcggt
cttctggaggttttgagccagaagaaaatgtacagaaagtaccacgccagacctaacttc
agacaaatgaaactggaaaatgtgtccgttgcgctggaattcttggagagagaacacata
aagctggtatcgatagacagcaaggccatcgtggatgggaacctgaagcttatcctgggt
ctgatctggactctgatcctgcactactccatctcaatgcccatgtgggaggacgaggac
gatgaggacrccaagaagctgacccccaagcagaggctgctgggatggatccagaacaag
gtgccccagctgcccatcaacaactttcaccgtgactggagggacggcaaggccctggga
gccctggttgacaactgtgccccaggcctgtgtcctgactgggagacgtgggatccyagc
cagcctgtggagaatgccagggaggccatgcagcaggctgacgactggctcggtgtgccc
caggtgatagcccctgaggaaatagtggatcccaatgtggacgagcactcggtgatgacc
tacctgtcccagtttcccaagtccaagctgaagcctggtgccccgctgcgctccaagact
ctgcaccccaagatggccaaggcctatggaccaggtattgagcccagaggtaacatggtg
ctgaagccggctgagttcgtcgtggagacagtggaggcggggctaggggaggtgctggtc
tacgtggaggacccagagggacacacagaggaggccagagtgatccccaacaatgacaag
aacaggacgtactctgtcatctacctgcccaaagtggagggccttcacaaggtgaaggtg
ctgttcgctgggcaggacatagacaggagtcctttcgtggtgagtgtgtccaaggccatg
ggagatcccaacaaggtgcaggccagaggaccaggactggagcctgtaggcaacgtggct
aacaagcctacctacttcgacatctacacagcaggtgccggtgctggagacgtgggtgta
atcatcgtggactcccagggcagaagagacaccgtggagatcattctggaaaacaagggg
gacagtattttccgttgcacctattgccctatcctggaggggtctcatgttatctatgtg
acgtttgctgggcagcagatacccagaagccctttcactgtccacatctcagaggccagc
aaccccaacgtgtgccgggcmtcagggagaggtctccagcctaagggggtgagggtgaaa
gaggtggctgacttcaaggtctacaccaagggagccggcagcggagagctcaaggtcacc
atcaaggggccaaagggactagaggagcctgtgaaggtgcgtgacgcaggagaaggggta
tatgagtgtgactactaccccatcatgactggcaaatacaccatcaccatcacctggggc
ggacagaccatcccacgcaggacgagtagccctctcaggaacagggttgaagagcctgtg
gtgaccatcggagagggcagccacccagagaatgtgaaggtgtatggtccaggtgtggag
aagtcaggtctgaaggccaacgagcccacctacttcactgtggactgcagcgaggcagga
caaggggatgtcagtatcggcatcaagtgtgctcccggcgtggttggtcctgcagaggcc
gacatcgactttgacatcatcaagaacgacaacgacacgttcacagtgaagtacatgccc
cccggccccggacgctacaccatcatggtgctgttcgctgaccacgaaatacccatcagc
cctttcagaatcaaggtggacccctctcatgacgctaacaaggtgagggcggagggaccc
ggactcaacaagacaggtgtggaggtaggtaagcccacccacttcaccatctacaccaag
ggagcgggcaaggccaagcctgaagtgcacttcaccggagcagccaaaggggacgctgtc
cgagactttgagatcattgacaaccatgactactcctacaccgtgcgctacactgcagtg
caacagggtaacatgtctatctcaatctgccacggcggtgaccccattccaagagcccct
tcaacatcactgtggccgccccttgacatcaacaagaagtcgacgttggaaggctcagga
gttcacagtgagctacgcacgggcgcggtggccaggcaagtggatgtgacagatcacctc
gccctctcgtcgccaatcccctgcaagctggagtctgacacggccacgaagtcacactgt
gaagtacattcccctgaggagggccctacaaagtggacatcagctatgatgggaaccctg
tgccgtgagcccttcactgtggagggggtgatgccccctgaccctcaaagtctcacccct
gctgtctctcaggtgcgtgcctatggcccaggcctccagggaggcatggtgggcaagccg
gcccccttcgccattgacaccaagggtgcgggcaccggcgggctgggcctgaccgtggag
gggccatgcgaggccaagatcgagtgccaggacaacggcgatggctcctgctctgtctcc
tacctgcccacagagcccggygaatacgccatcaacatcctgtttgccgagcagcacatc
cccggctcccccttcaaggccatggtacagtccgtgtttgaccccagtaaggtcacggcc
agtgggccaggcctggagagagggaaggtcaacgaggcagggtcgttcgtagtggactgc
gccaaggctggggacgccgagctgaccattgagattatttcmgattcggggtcgaaggcg
gaggtgcgtgttcagaacaacagtgatgggacctattctatcacgtacatcccacagttc
catggcatgtatactatcaccattaaatacggggggcacgccgtgcccaagttccccgcc
cgtgtgcaggtggacccagccgtggataccagcgggctccacattcctactgcatctgtg
ttgtccacaggggtcctgagggaggtgaccacccatttcatcgtggatgcccgtgccaag
agcaagaccgggggcagccatgtcaaggcccgcatcgtcaacccttcaggcgccaacaca
gacgcctacatcactgacaagggagaaggcacctacagagtggaatacgctgcctatgag
gatgggatacacctgattgaggtgctgtatgatgatgtggcggtgcctaacagtccgttc
cgtgtcccggtaacggagggttgtgaccccagccgtgtcagagcctacggtcctggtctg
gaggagggcctggtcgacaaacccaaccgcttcaccgtggaaaccaggggtgctggtaca
gggggtctgggcctggccatcgarggtccatcagaggctaagatgtcctgtaaggacaat
aaagatggcagctgcagtgtggagtacatccccttcaccccgggtgactatgacgtcaac
attaccttcggaggcttgcccatcccagggagtcctttccgtgtgccagtgagagagctg
gtggacccaagtaaggtgaggtgttcaggcccagggctgggtagtggagtcagagcccat
gttcctcagaccttcactgtggacaccagcaaggctggcctcgcccctctgggrgtggtg
ctgtacggacctactggagtggctgagccagtgaacatcacagataatggagacggaaca
cacacagcgacctacaccccggccaaggacggcccgtacaccgtgtgtgtgaagtacgct
gaccaggaggtccctcgcagtccttataagatcaagacattgcctgctcatgatgccagt
aaggtgcktgccagtgggccaggtttgaatgcccagggtgtgcctgccagcctgccygtg
gagttcaccatcgatgcccgcgatgctggcgaaggcctrctcactgtgcagatactggac
ccagaaggcaagccgaaaaaggccaatatccgtgacaacagagatgggacgtacacagtg
tcctatgtaccagacatggcagggcgctacaccatcaccatcaagtatggaggagacgag
attccctactcaccctatcgtatccatgccctgcccactggagacgccagcaagtgtctg
gtcacagtttccattggaggacatggattgggttcaggcctcggacccaccatccagatc
ggcgaggagaccgtcatcaccgtggacgcaaaagctgctgggaagggaaaggtgacctgt
aaggtgtcgacgccagatggggcggagctagacgtggacgtggtggagaattccgacgga
acgtttgacatctactacacggctccggaacccgggaaatacgtcatcaccatccgcttt
ggaggagaacacattccaaacagccccttccacgtggtggccagtgataccgtccctata
atagaggaaccgtgtgacaagctccagttacaacagccctaccaggcctaccagggctac
ccccctcactgggccacagaggagcccgtcacccccggggatatcatggagcctatgctc
cgccccttcaacctggtcattccgttcaccgttcagaagggagagatcacaggtgaggtg
cgtatgccctcaggtaagacagcccgtcctaacatcacagacaacaaggatgggacagtc
acagtgaagtacgcccctacagagaaaggcctgcacgagatggacatcaaatatgacgga
aaccacatcccaggaagtcccctccagttctatgtagatgccattaacagtggtcatgtg
acagcttatggtcctggtctgagtcacggcatggtcaacaaacctgccaccttcaccatc
gtcaccaaggatgcaggggaaggtggcctgtccctggcggtggagggtccctctaaggca
gagatcaactgtaaggacaacaaggatggaacctgtactgtgtcctaccttcccactgta
ccaggagactacaacatcatcgtcaagtttgacaacaaacacatcgccggcagcccctac
actgccaagatcacag
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