Salarchaeum sp. JOR-1: FQU85_11725
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Entry
FQU85_11725 CDS
T06128
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQU85_11725 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salr03400
]
FQU85_11725 (nth)
Enzymes [BR:
salr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FQU85_11725 (nth)
DNA repair and recombination proteins [BR:
salr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FQU85_11725 (nth)
Prokaryotic type
FQU85_11725 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
IMS_HHH
DUF3349
Motif
Other DBs
NCBI-ProteinID:
QDX41537
UniProt:
A0A518SDQ8
LinkDB
All DBs
Position
complement(2066886..2067569)
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AA seq
227 aa
AA seq
DB search
MGERLDSRSAQVEEVIDRLSDEYPEPEISLNFSNRLELLIAVVLSAQCTDERVNTVTAEL
FETYDSAEDYANVDEEELAEDINSITYYNSKAGYITNACAKIVDEHDGEVPDSMSELTDL
PGVGRKTANVVLQHGHDITEGIVVDTHVQRISRRLAITEEERPEQIEDDLMDVVPREHWK
NYTHWLIAHGRDTCTARNPDCADCLLEDICPSSKLDNSVDLASGEAW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacgtctcgattctcggagcgcacaagtcgaggaggtcatcgaccgactcagc
gacgagtacccggaacccgaaatctccctgaacttttcgaaccggctcgaactcctcatc
gccgtcgtgctgtccgcgcagtgcacggacgagcgcgtgaacacggtcaccgccgagttg
ttcgagacgtacgattccgcggaggactacgcgaacgtggacgaggaggaactcgcggag
gacatcaactcaatcacgtactacaactcgaaggcgggctacattacgaacgcctgcgcg
aaaatcgtcgacgagcacgacggcgaagtgccggactcgatgtccgaactcaccgacctc
cccggcgtcggccggaagaccgcgaacgtcgtgctccagcacggccacgacatcacggag
gggatcgtggtggacacgcacgtccagcgcatcagccgccgcctcgccatcaccgaggag
gaacgccccgagcaaatcgaggacgacctgatggacgtagtcccccgggaacactggaag
aactacacgcactggctcatcgcgcacggccgcgacacctgcaccgcccgcaaccccgac
tgcgcggactgcctcctcgaagacatctgtccgtcctcgaaactcgacaacagcgtggat
ctcgccagcggcgaggcgtggtga
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