Salegentibacter sp. T436: AO058_16495
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Entry
AO058_16495 CDS
T04614
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
salt
Salegentibacter sp. T436
Pathway
salt03030
DNA replication
salt03410
Base excision repair
salt03420
Nucleotide excision repair
salt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AO058_16495
03410 Base excision repair
AO058_16495
03420 Nucleotide excision repair
AO058_16495
03430 Mismatch repair
AO058_16495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salt03032
]
AO058_16495
03400 DNA repair and recombination proteins [BR:
salt03400
]
AO058_16495
Enzymes [BR:
salt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AO058_16495
DNA replication proteins [BR:
salt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AO058_16495
DNA repair and recombination proteins [BR:
salt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AO058_16495
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO058_16495
MMR (mismatch excision repair)
DNA ligase
AO058_16495
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AO058_16495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Mig-14
HHH
5_3_exonuc
Zn_ribbon_Top1
Auto_anti-p27
PADR1_N
Motif
Other DBs
NCBI-ProteinID:
APS40379
LinkDB
All DBs
Position
complement(3724280..3726274)
Genome browser
AA seq
664 aa
AA seq
DB search
MSTEEKIKQLREELHRHNYLYYIEDKPEISDYDFDMKLKELQELEEKNPEFDDPNSPTRR
VGGAITKNFETVVHDYRMYSLSNSYSKEELEDWEKRIEKSIGGKVQYVCELKYDGASISL
TYEDGKLKRAVTRGDGFQGDDVTNNIKTIRSVPLKLKGEFPQKFDIRGEIVLPYEGFAKM
NAERVEAGEEPYANPRNTASGSLKLQDSAEVAKRPLDCLLYSLVADSLPVKSQFEGLEKA
RDWGFKVPPEAELKNSIAEVLDYVNYWDQHRHDLPYETDGVVVKVNSFDQQDELGYTAKS
PRWAMAYKFKAEQESTKLNKITYQVGRTGAITPVANLEPVQLAGTTVKRASLHNADQIEK
LDVREGDTVFVEKGGEIIPKIVGVDFTKRDPETPETKYAETCPECDSELIRKEGEAQHYC
PNYNGCPPQIIGRIQHFISRKAMDIEGLGGETVALLVNANLITNYADLYTLKKEDILPLE
RMAEKSAENLINGIEKSKEIPFERVLFALGIRYVGETVAKKLAKHYKNIDALASASTEDL
TAVDEIGERIAESVTDFFASEENREIVQRLKDYGLQLEIAVEELENQSDLLEGITFVISG
VFEKVARNELKKMIEDNGGKVSGSISGKTDYLVAGENMGPSKLAKAEKLGTKIITEEEFL
EMLS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgaagaaaagatcaaacagttacgcgaagaattacaccgccataattattta
tattatatagaggataagcccgagatcagcgattacgattttgatatgaagctgaaagaa
ttacaggagctggaagaaaaaaatcctgaatttgatgaccctaattctcccacgcgccgt
gtaggtggtgcgataactaaaaattttgagaccgtagttcacgattatagaatgtactcg
ctttccaattcttactctaaagaagagctggaagactgggaaaagcggatcgagaaatct
attgggggtaaagtacagtatgtttgcgaattaaaatacgatggagcttctattagcctg
acttatgaggatggaaaattaaaacgtgcagttacccgtggggatgggttccagggagat
gatgttaccaataatataaagaccattagatctgtacctttaaaactgaagggagaattt
ccgcagaaatttgatattcggggtgaaatagtgttgccttatgaaggttttgcaaaaatg
aatgccgaaagggtagaagcaggcgaagaaccttatgcaaatcctagaaataccgcttcc
ggaagcttaaaactccaggatagtgctgaggttgccaaaagacctttagattgcctgctt
tatagtttggtagccgatagtttaccggtaaaatcacaatttgaaggtttggaaaaagcc
agggattggggctttaaagtgccacctgaagccgagttaaaaaatagtatagctgaagtt
ctcgattacgtgaattattgggaccaacaccgccacgatttaccttatgaaaccgatggg
gtagtggtgaaggtaaatagttttgatcagcaggatgaattaggttataccgctaaatcc
ccacgctgggcaatggcttataaatttaaggctgaacaggagagtactaaattaaataag
atcacctaccaggttgggagaacaggagcaatcacgcccgtagcaaatcttgaaccggta
caattagccggaactactgtgaaacgtgcgtctttacacaatgccgatcaaattgaaaaa
ctggatgtacgggaaggagatactgtttttgttgaaaaaggaggtgaaattattccgaag
attgtgggggttgatttcactaaaagagatcccgaaactcccgaaactaaatatgccgaa
acctgtcccgaatgcgatagcgagttaattagaaaagaaggcgaagcgcaacattactgc
cctaattataatggatgtccgccgcaaattatagggagaattcaacattttatttcccga
aaagcaatggatatagaaggcctgggtggagaaaccgttgctttgttggtgaatgctaat
ttaattaccaattatgccgacctatataccctgaaaaaagaagatattcttccattggaa
cgaatggcagagaaatcggcggaaaaccttattaatggaattgaaaaatctaaagaaatt
ccttttgaaagggttttatttgcccttggaataagatatgtgggcgaaactgtagctaaa
aaactagcaaagcattacaaaaatatagatgctttggcttcggcttcaaccgaagatctt
acagcggttgatgaaattggagagcgcatagccgaaagtgtaaccgatttttttgcttcc
gaagaaaacagggagatcgtgcagcgtttaaaggactacggacttcaattggaaattgct
gtagaagaactggaaaaccagagcgatttacttgagggcattacttttgtgatttccggg
gtttttgaaaaagttgccagaaatgaactcaagaaaatgatagaagataacggcggaaaa
gtttccggttcaatttcaggaaaaacggactatttggttgcaggcgaaaatatggggccc
agcaaactggcaaaggcagaaaaactggggactaaaattattacggaagaagaattcctg
gagatgttatcttga
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