Streptomyces noursei NK660: DC74_5619
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Entry
DC74_5619 CDS
T03082
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
salu
Streptomyces noursei NK660
Pathway
salu03030
DNA replication
salu03410
Base excision repair
salu03420
Nucleotide excision repair
salu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DC74_5619
03410 Base excision repair
DC74_5619
03420 Nucleotide excision repair
DC74_5619
03430 Mismatch repair
DC74_5619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salu03032
]
DC74_5619
03400 DNA repair and recombination proteins [BR:
salu03400
]
DC74_5619
Enzymes [BR:
salu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DC74_5619
DNA replication proteins [BR:
salu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DC74_5619
DNA repair and recombination proteins [BR:
salu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DC74_5619
NER (nucleotide excision repair)
GGR (global genome repair) factors
DC74_5619
MMR (mismatch excision repair)
DNA ligase
DC74_5619
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DC74_5619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AIA06073
LinkDB
All DBs
Position
6407982..6410198
Genome browser
AA seq
738 aa
AA seq
DB search
MAGEQHAAASEVPAAAREEHAQLAEQIEEHRFRYYVKDAPVVSDAEFDKLLRALEALEET
HPGLRTPDSPTQKVAGSYATEFTEVAHRERMLSLDNAFDDEELSAWAERIAGELGGDPKG
AGYHFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLTGDRVP
ALVEVRGEVYFPMEKFLELNERLVADGKPPFANPRNAAAGSLRQKDPKVTATRPLHMVVH
GLGARDGLEIDRLSEAYDLLQEWGLPTASHNRVVDSLAAVREFIAHYGDPETRRTAVEHE
IDGVVVKLDEIRLQGRLGATSRAPRWAIAWKYPPEEVNTKLVDVRVGVGRTGRVTPYAVV
EPITVAGSEVEFATLHNQDVVKAKGVLIGDTVVIRKAGDVIPEILGPVVDLRDGTEREFV
MPAECPECGSALQPAKEGDIDLRCPNARSCPAQIRERLFYLAGRKCLDIENFGYVAATAL
SQPLEPAEPPLTDEGGLFDLSVERLLPIKSHVLDPDTGLPKRDPKTGEEKVVTFFANQKG
EPKKNTLAMLENIQAAKERPLARILTGLSIRHVGPVAAQALAREFRSIDRIRDASEEELA
AVDGVGGTIAASLKQWFAVDWHQEIIERWRAAGVRMEEEQTGDAGPRPLEGVTVVVTGTL
QSHTRDGAKEALQALGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQLKVPVLDDDGFAVLL
EQGPEAARAVAVTPPEEE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcgaacagcacgcagcggcatccgaggtgcccgccgcggcacgggaggagcac
gcgcagctcgctgagcagatcgaggagcaccgcttccgctactacgtgaaggacgccccg
gtcgtcagcgacgcggagttcgacaagctgctgcgcgccctggaggccctggaggagacc
catcccgggctgcgcacgccggactcgccgacccagaaggtcgccggctcctacgccacg
gagttcaccgaggtcgcgcaccgcgagcggatgctctcgctggacaacgccttcgacgac
gaggagctgtcggcctgggccgagcggatcgccggcgaactgggcggcgacccgaagggc
gccggctaccacttcctgtgcgagctgaaggtcgacggcctcgcggtcaacctcacctac
gagcacggccggctcacccgcgccgccacccgcggcgacggccgcaccggcgaggacatc
acgcccaacgtccgcaccatcgccgagatcccgcaccgcctcaccggcgaccgggtcccc
gcactcgtcgaggtccgcggggaggtctacttcccgatggagaagttcctggagctcaac
gagcgcctggtggccgacggcaagcccccgttcgccaacccccgcaacgccgcggccggt
tcgctgcgccagaaggaccccaaggtcaccgccacccgcccgctgcacatggtcgtgcac
ggcctcggcgcccgcgacggcctggagatcgaccgcctctccgaggcgtacgacctgctc
caggagtggggcctgcccaccgcttcgcacaaccgcgtcgtcgactcgctcgccgcggtg
cgggagttcatcgcccactacggcgaccccgagacccgccgcaccgccgtcgagcacgag
atcgacggcgtcgtggtcaagctcgacgagatccggctccagggccggctgggcgccacc
tcgcgggcgccgcgctgggcgatcgcctggaagtacccaccggaggaggtcaacaccaag
ctggtggacgtccgcgtcggcgtcggccgcaccggccgggtcacgccgtacgcggtcgtc
gaaccgatcaccgtcgccgggtccgaggtggagttcgccaccctgcacaaccaggacgtg
gtcaaggccaagggcgtcctcatcggggacaccgtcgtcatccgcaaggccggcgacgtc
atcccggagatcctgggcccggtggtggacctgcgggacggcaccgagcgggagttcgtg
atgcccgccgagtgccccgagtgcggatcggcgctccagcccgccaaggaaggcgacatc
gacctgcggtgtcccaacgcccggtcctgccccgcccagatccgcgagcggctgttctac
ctcgccggccgcaagtgcctcgacatcgagaacttcggctacgtcgccgccaccgcgctc
agccagcccctggagcccgccgagccgccgttgacggacgagggcggcctcttcgacctc
tccgtcgagcggttgctgcccatcaagtcccacgtcctggacccggacaccggtctgccc
aagcgcgatccgaagaccggtgaggagaaggtcgtcaccttcttcgccaaccagaagggc
gagccgaagaagaacaccctcgccatgttggagaacatccaggccgccaaggagcgcccg
ctggcccggatcctcaccggcctgtcgatccgtcacgtgggcccggtcgcggcgcaggcg
ctggcccgcgagttccgctccatcgaccggatccgggacgccagcgaggaggaactggcc
gccgtggacggcgtcggcggcaccatcgcggcgtcgctcaagcagtggttcgccgtggac
tggcaccaggagatcatcgagcgctggcgggccgcgggcgtccggatggaggaggagcag
acgggtgatgcgggcccgcgtccattggaaggcgtcaccgtcgtggtaacgggcacactt
cagtcacacacgagagatggcgcgaaagaagcgttgcaggctctcggagcgaaggtgacc
ggatccgtttccaagaagaccggattcgtagtggtgggcgacaaccccggttcgaagtac
gacaaagccatgcagttgaaggtccccgtgttggacgatgatggcttcgctgtgctgctg
gagcagggtcccgaggcagcacgagcggtagctgtcactccgcctgaggaggagtga
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