Salinivibrio sp. YCSC6: E8E00_09150
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Entry
E8E00_09150 CDS
T05946
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly01501
beta-Lactam resistance
saly01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E8E00_09150
01503 Cationic antimicrobial peptide (CAMP) resistance
E8E00_09150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saly03036
]
E8E00_09150
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saly02000
]
E8E00_09150
01504 Antimicrobial resistance genes [BR:
saly01504
]
E8E00_09150
Chromosome and associated proteins [BR:
saly03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E8E00_09150
Transporters [BR:
saly02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E8E00_09150
Antimicrobial resistance genes [BR:
saly01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E8E00_09150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PTS_EIIA_1
SRP1_TIP1
Motif
Other DBs
NCBI-ProteinID:
QCF36323
LinkDB
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Position
I:complement(1995426..1996547)
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AA seq
373 aa
AA seq
DB search
MKKGMLLGAVILAGVAFWLWSGAGPTNEDTATSAPSARAVDVMTAEVETRPIAPSLSLVG
NVKAHQQVNIESEVSARIETVHVKPGETVQKGAPLVTFNRAKAQAAVLEASAYLNDEQRK
LKEYTKLAQRGALTQTELDAQQASVNIAKARLQSAQSDLDDHRLVAPFSGRIGLFDLSVG
QRVDVGESLFSLDNLSQMNLDIQVPEQYIGLLYPNMPVAVTSQAYPDEAFTGTVSVVDSR
VDKDALSVSVRVALDNPERQLQPGMLMEAKLTLPEQYAVIVPVQALQYSGTRRYVFRIDD
EGIAHRTEITLGARIDNQVVVSKGLEPGQHIVVQGLVNMRDGAQVSVLNAEARKNQADDQ
SRVTETVSETEAS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggatgctactgggcgccgtgatattggccggcgttgcgttctggttatgg
agtggagcggggcccacgaacgaagatacggcaacctccgctccaagcgcgcgcgctgtg
gatgtgatgacagcggaagtggaaaccagaccgattgcgccgtcgttatctttggtgggg
aatgtcaaagcccaccaacaggttaatattgaatcggaagtgtcggcgcgcattgaaact
gttcacgtcaagccgggcgaaaccgtgcaaaaaggggcgccgttggtgacctttaatcgc
gccaaagctcaagccgcggtgctggaagcgtcggcttacctcaatgacgagcagcgcaag
ctcaaagagtataccaagctggcgcagcgtggtgcgttaacgcaaaccgagttggatgca
cagcaagcgagtgtcaatatcgccaaggcgcgtttgcaatcggcgcaatctgatttagat
gatcaccgtttagttgcgcccttttcaggtcgcattggcctgtttgatttaagtgtcggc
cagcgcgtggatgtgggcgaatcgctctttagtctcgataatctttctcagatgaacctc
gatattcaagtaccagaacaatatatcgggttgctgtaccccaatatgccagtggcggtc
acgtcgcaagcctatcccgatgaggcctttaccggcacggtgagtgtggtggattctcgg
gtggataaagacgcgttatcggtcagtgttcgcgtcgcgctagataatcctgaacgtcaa
ttgcagcccggtatgctgatggaggcgaaactgactttgcctgagcaatacgcggtgata
gtgcctgtgcaagctctgcaatattccggcacacgacgttatgttttccggattgatgat
gaaggcattgctcatcgtactgaaatcacccttggcgcgcggattgataaccaagtggtg
gtaagtaaaggactcgagccgggtcagcacattgtggtgcaaggtttagtgaacatgcgt
gatggggcgcaagtctcggtattaaatgcggaagcgcgtaaaaaccaagctgatgatcaa
agccgtgtgactgagaccgtttctgagacggaggctagctaa
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