Streptomyces ambofaciens: SAM23877_4093
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Entry
SAM23877_4093 CDS
T04055
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAM23877_4093 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_4093 (nth)
Enzymes [BR:
samb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAM23877_4093 (nth)
DNA repair and recombination proteins [BR:
samb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAM23877_4093 (nth)
Prokaryotic type
SAM23877_4093 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AKZ57138
UniProt:
A0A0K2AVY2
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All DBs
Position
4343634..4344767
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AA seq
377 aa
AA seq
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MKKNADKDPVPADARPASAKKAAPAKKKAAPAKTSAAARKTASAKEAAPSKKAAPAETSP
SAKKAAPSKKAAPAKKGSAAKSASVRRQAPARKPAVAPKKAAAAVKGVAPAKTVAPKSPR
AESRTALVRRARRIDRELAEVYPYAHPELDFENPFQLVVATVLSAQTTDLRVNQTTPALF
AKYPTPEDLAAANPEEVEEILRPTGFFRAKTKSVIGLSKALVEDFGGEVPGRLADLVKLP
GVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWQWTDETDPDKIEAAVGALFPKSDWTDL
SHHVIWHGRRICHARKPACGACPIAPLCPAYGEGETDPEKARKLLKYEKGGFPGQRLNPP
QAYLDAGGTPAPPLGAG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagaacgccgacaaggacccggtacccgccgacgccaggccggcctccgcgaag
aaggcggcgcccgcgaagaagaaggcggcgcccgctaagacgtcggctgccgccaggaag
acggcctccgcgaaggaggcggcgccctcgaagaaggcggcgcccgccgagacctcgccc
tccgcgaagaaggcggcgccctcgaagaaggccgcgcccgccaaaaaggggagcgcggcg
aagtcggcctccgtcaggaggcaggcccccgccaggaaacccgccgtcgcccccaagaag
gctgccgccgccgtcaagggcgtcgccccggcgaagaccgtcgccccgaagtcgccgcgc
gcggagtcccgcaccgccctggtccgccgggcccgccgcatcgaccgcgaactcgcggag
gtctacccgtacgcccacccggagctggacttcgagaacccgttccagctcgtcgtggcc
acggtgctgtccgcccagaccaccgatctgcgcgtcaaccagacgacgcccgccctcttc
gccaagtaccccacccccgaggacctggccgccgccaaccccgaggaggtcgaggagatc
ctgcgcccgaccggcttcttccgggccaagaccaagtcggtcatagggctctccaaggcc
ctggtggaggacttcggcggcgaggtccccggccgcctcgcggacctcgtcaaactgccc
ggcgtcggccgcaagaccgccttcgtcgtcctcggcaacgccttcggccgcccgggcatc
accgtggacacgcacttccagcgcctggtgcgccgctggcagtggaccgacgagaccgac
ccggacaagatcgaggcggccgtcggcgcgctcttccccaagagcgactggacggacctc
tcccaccacgtgatctggcacggccgccggatctgccacgcccgcaagcccgcctgcggc
gcctgccccatcgccccgctctgcccggcgtacggcgagggcgagacggacccggagaag
gcgaggaagctgctgaagtacgagaagggtggcttccccggccagcgcctgaatcccccg
caggcgtacctggacgcgggcgggaccccggcgcccccgttgggggccgggtga
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