Sphingobium amiense: SAMIE_1000370
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Entry
SAMIE_1000370 CDS
T06684
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sami
Sphingobium amiense
Pathway
sami00630
Glyoxylate and dicarboxylate metabolism
sami00680
Methane metabolism
sami01100
Metabolic pathways
sami01120
Microbial metabolism in diverse environments
sami01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMIE_1000370
09102 Energy metabolism
00680 Methane metabolism
SAMIE_1000370
Enzymes [BR:
sami01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SAMIE_1000370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_21
Fer4_6
Fer4_16
Fer4_8
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
BBD96536
UniProt:
A0A494VZH9
LinkDB
All DBs
Position
35356..38202
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AA seq
948 aa
AA seq
DB search
MSFSREMDRGTPPAVAGDRSVTLTIDGQSVTLPEGTSIMRAASLLGGSIPKLCATDSLES
FGSCRLCLVEVEGRNGYPASCTTPVAEGMVVRTQTERLKQLRRGVMELYISDHPLDCLTC
AANGDCELQDQAGAVGLRDVRYGYDGATNMGQAKDQSNPYFDFDPSKCIVCSRCVRACDE
VQGTFALTVENKGFESKVVASQGEGFLGSECVSCGACVQACPTASLIEKKVVETGTPDRA
VVTTCAYCGVGCTFRAEMRGEELVRMVPWKEGKANRGHSCVKGRFAWGYAQHQDRVLNPM
IRASVDEPWREVSWEEAIAYTASEFRRIQNKYGMRSIGGITSSRCTNEETFLVQKLIRQG
FRNNNVDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVAQADVILVIGANPTDGHPVLASR
MKKRLRQGAKLIVIDPRRTDLVRSPHIAAEHHLALRPGTNVAMMTALAHVIVTEKLYDES
FIRERCDWDEFADWADFVSDPARSPEAIEPLTGVGAQDVRAAARLYATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMATGNVGRDGVGVNPLRGQNNVQGACDMGSFPHEFSGYRHVSD
GKTRTLFEEAWGVPLDGEPGLRIPNMLDAAVDGAFKGLFVQGEDILQSDPNTHHVAAGLA
AMECVVVQDLFLNETANYAHIFLPGSTFLEKDGTFTNAERRIQRVRKVMAPLNGYADWEI
VQLVANAMGLGWSYDHPAQIMEEIAALTPTFTGVSYDRLEAEGSLQWPANDAAPHGTPLM
HIDGFVRGKGKFIVTDYVPTDEKTGPRFPLLLTTGRILSHYNVGAQTRRTANTAWHPEDR
LEIHPSDAENRGLKDGDWVTLRSRAGETTLRALVTERVAPGVVYTTFHHPETQANVITTD
YSDWATNCPEYKVTAVQVSASNGPSDWQQDYARQAERSRRIGVPAAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcgcgcgaaatggatcgcggcacgccgcctgcggtcgcgggtgacaggagc
gtgacgctgaccatcgacggccagagcgtgaccctgcccgaaggcaccagcatcatgcgc
gctgcctcgctgctgggcggttccatccccaagctctgcgccaccgatagcctcgaaagt
ttcggttcctgccgcctgtgccttgtcgaggtggaggggcgcaacggctatccggcgtcc
tgcaccacgccggtggccgaaggtatggtcgtccgcacccagaccgaacggctcaagcag
ttgcggcgcggggtgatggaactctacatctccgaccatccgctcgactgcctgacctgc
gcagccaatggcgattgcgaactgcaggatcaggccggcgcggtcggcctgcgcgatgtg
cgctatggctatgacggcgcgaccaacatggggcaggcgaaagaccagtccaacccctat
ttcgatttcgatcccagcaagtgcatcgtctgctcgcgctgcgtgcgcgcatgcgacgaa
gtgcaggggacgttcgcgctcactgtcgagaataaggggtttgaatccaaggtcgtcgcg
tcgcagggagaaggcttcctcggatcggaatgtgtgtcctgcggggcgtgcgttcaggcc
tgccccaccgcgagcctgatcgagaagaaagtggtcgaaaccggcacgcccgaccgcgca
gtcgtcaccacctgcgcctattgcggcgtgggctgcaccttccgcgcggaaatgcggggc
gaggaactggtgcgcatggtgccgtggaaggaaggcaaggcgaaccggggtcatagctgc
gtcaagggccgcttcgcctggggctatgcccagcatcaggaccgcgttctcaatcccatg
atccgcgcgtcggtggatgaaccgtggcgggaagtttcgtgggaggaggcgattgcctat
accgcgtccgagttccgccgcatccagaacaaatatggcatgcgcagcatcggtggcatc
acgtcgagccgctgcaccaacgaggaaactttcctcgtccagaagctgatccggcagggt
ttccgcaacaacaatgtggacacctgcgcgcgggtttgccactcgcccaccggctatggc
ctcggccagactttcggcacatcggcgggcacgcaggatttcgacagcgtcgcccaggcc
gatgtcatcctggtgatcggcgccaatccgaccgacggtcatccggtgctcgcgtcgcgc
atgaagaagcggcttcggcagggcgcgaagctgatcgtgatcgacccccgccggacggat
ctggtgcgttctccgcacatcgccgcggaacatcatctggcgctgcgcccgggcaccaat
gtcgcgatgatgacggcgctcgcccatgtcatcgtcaccgagaagctctatgacgaaagc
ttcattcgcgagcggtgcgactgggacgaatttgccgactgggccgatttcgtgtccgac
cccgcgcgctcgcccgaagccatcgagccgctgaccggcgtcggggcgcaagatgtgcgc
gcggcggcgcggctctatgccacgggcggcaatggcgcgatctattacggccttggcgtc
accgaacatagtcagggcagttcgacggtcatggccatcgccaatctcgccatggccacc
ggcaatgtcgggcgcgacggcgtaggggtcaatcctctgcgcggccagaataatgtgcag
ggcgcgtgtgacatgggcagcttcccgcatgaattttcgggctatcgccatgtgtcggac
ggcaagacccgcaccctgttcgaagaggcgtggggcgtgccgctggacggcgagccgggc
ctgcgcatccccaatatgctcgacgcggcggtcgatggcgcgttcaaggggctgttcgtt
cagggggaggatattctccagtccgatcccaatacccaccatgtcgccgccggccttgcc
gccatggaatgcgtggtcgtgcaggatctgttcctgaacgaaaccgccaactacgcccat
atcttcctgcccggatcgaccttcctggaaaaggacgggacgttcaccaatgcggagcgc
cgcatccagcgggtccgcaaggtcatggcgccgctcaacggctatgccgactgggagatc
gtgcaactggtggcgaacgccatggggctgggctggagctacgaccatcccgcgcagatc
atggaagagatcgcggcgctcaccccgaccttcaccggcgtcagctatgacaggctggag
gcggaggggtcgctgcaatggcccgccaacgatgcggcgccccacggaacgccgctgatg
cacattgacgggttcgtgcggggcaagggcaagttcatcgttacagactatgtgccgacc
gacgagaagaccgggccgcgcttcccgctcctgctcacgaccgggcgcatcctgtcccac
tataatgtcggcgcgcagacccgtcgcaccgccaacaccgcctggcaccccgaggaccgg
ctggaaatccatcccagcgatgccgagaaccggggtctgaaggatggcgactgggtgacg
ctgcgcagccgggcgggggaaacgacgctgcgcgcgctggtaacggagcgcgttgcgccg
ggcgtcgtctacacgaccttccaccatcccgaaacgcaggcgaatgtcatcaccaccgac
tattcggactgggccaccaactgcccggaatataaggtgacggcggtgcaggtgtcggcg
agcaacgggccgagcgactggcagcaggactatgcccggcaggccgaacgcagccgccgt
atcggcgtccccgcagcggcagagtag
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