Sphingobium amiense: SAMIE_1003320
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Entry
SAMIE_1003320 CDS
T06684
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sami03016
]
SAMIE_1003320
Enzymes [BR:
sami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SAMIE_1003320
Transfer RNA biogenesis [BR:
sami03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SAMIE_1003320
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Terminase_6
Motif
Other DBs
NCBI-ProteinID:
BBD96831
UniProt:
A0A494VY98
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All DBs
Position
complement(401588..402166)
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AA seq
192 aa
AA seq
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MAAARDAAYAHPMHRLFVAIRPPAALRSQLLDLMEGVEGARWQDDDQLHLTLRFIGEVDR
RMAEDIAAALTAIRFTSFDAQIHGVGAFDRKGVVDTLWAGVQPRDPLAHLHRKIDRACVA
LGLAPEGRAYLPHITLARFGRGGAVVDPFLVRHAALSSAPFRVDRFTLFESHVGHAGARY
EAVADYRRDSRS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgcgcgatgcggcctatgcccatcccatgcaccgcctgttcgtcgctatc
cgcccgcctgccgcgctgcgcagccagttgctcgacctgatggaaggggtcgagggcgcg
cgctggcaggatgacgatcaacttcacctgacgctgcgcttcatcggcgaagtcgaccgg
cgcatggccgaagacatcgccgccgcgctcaccgccatccgctttacgtccttcgacgca
cagatccacggcgtcggcgcgttcgaccgcaaaggtgtggtcgacactctgtgggcgggc
gtccagccgcgcgatccgctcgcgcatctccaccgcaagatcgaccgcgcctgcgtggcg
ctcggcctcgcgcccgaaggccgcgcttacctgccgcatatcaccctcgcccgcttcggg
cgcggcggcgctgtggtcgatcccttccttgtccgccacgccgccctgtcgagcgcacca
ttccgtgtcgaccgtttcaccctgttcgaaagccatgtcggccacgccggcgcccgctac
gaagcggtcgccgactatcgccgcgattcccggtcctga
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