Sphingobium amiense: SAMIE_1005550
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Entry
SAMIE_1005550 CDS
T06684
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sami03016
]
SAMIE_1005550
Enzymes [BR:
sami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAMIE_1005550
Transfer RNA biogenesis [BR:
sami03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMIE_1005550
Prokaryotic type
SAMIE_1005550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BBD97054
UniProt:
A0A494VXC8
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All DBs
Position
659838..660824
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AA seq
328 aa
AA seq
DB search
MHGWIILDKPLGLGSTQAVSAVKRALRHSGAGKVKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKIYDFTVHFGVQTDTLDLEGKAVARSDRRPTLAQVEAILPRFTGPIEQAPPA
YSAILIDGQRAYDLARKGEEVEMKTRAVTIHALHIRSSPARGGGPAQPVEGYPAIERAIP
LRLAGGQPPPLPGEDVHQITLTAHVSKGTYIRSLARDIALALGTVGHVTMLRRLKAGPFT
LDPAISLDKLDEAARGGGLGSLMLPLTAGLDDIPALPVTPDEALALRQGKALVGKPHTGL
LLAMLGETPIALVQSSGPEIRVVRGFNL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgataaacccttgggcctcggctccacccaggccgtcagc
gcggtcaagcgcgccctgcgtcatagtggcgcgggcaaggtcaaggtcgggcatggcggc
acgctcgatccgctggcgaccggcgtgctgccgatcgcggtcggcgaggcgaccaagctc
gcgggacggatgctcgacagcgacaaaatttacgattttactgttcacttcggtgtccag
accgacacgctcgatctggaggggaaggcggtcgcccgcagcgaccgtcgcccgaccttg
gcgcaggtcgaggcgatcctgccccgcttcaccggccctatcgaacaggcaccccccgcc
tacagcgcgatcctgatcgacggccagcgcgcctacgacctcgcgcgcaagggcgaggaa
gtggagatgaagacgagggcggtgacgatccacgcgctgcacatcagatcctcccctgca
aggggagggggaccggcgcagccggtggaggggtatccggctatcgagagggcgataccc
ctccgtctggccggtggccagccacctccccttccaggggaggatgttcatcagatcacc
ctcaccgcccacgtctccaaaggcacctatatccgcagcctcgcccgcgacatcgcgctg
gcgctgggcacggtcggccatgtcaccatgctgcgccgcctgaaggctggcccgttcacg
ctcgatccggcgatttcactggacaaattggacgaagctgctaggggcggcggcctcggc
agtcttatgctgccgttgacggcggggctggacgacatcccggctctccccgtcactccc
gatgaagcgctcgctctccgccaggggaaggcgctcgtggggaaaccgcacaccggtctt
ctgctggcgatgctgggcgaaacgcccatcgcgctggtgcagtccagtggcccggaaatc
cgggtggtgcgcggcttcaatctctag
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