Sphingobium amiense: SAMIE_1006320
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Entry
SAMIE_1006320 CDS
T06684
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sami
Sphingobium amiense
Pathway
sami00071
Fatty acid degradation
sami00280
Valine, leucine and isoleucine degradation
sami00310
Lysine degradation
sami00362
Benzoate degradation
sami00380
Tryptophan metabolism
sami00410
beta-Alanine metabolism
sami00640
Propanoate metabolism
sami00650
Butanoate metabolism
sami00907
Pinene, camphor and geraniol degradation
sami00930
Caprolactam degradation
sami01100
Metabolic pathways
sami01110
Biosynthesis of secondary metabolites
sami01120
Microbial metabolism in diverse environments
sami01200
Carbon metabolism
sami01212
Fatty acid metabolism
Module
sami_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SAMIE_1006320
00650 Butanoate metabolism
SAMIE_1006320
09103 Lipid metabolism
00071 Fatty acid degradation
SAMIE_1006320
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SAMIE_1006320
00310 Lysine degradation
SAMIE_1006320
00380 Tryptophan metabolism
SAMIE_1006320
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SAMIE_1006320
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SAMIE_1006320
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAMIE_1006320
00930 Caprolactam degradation
SAMIE_1006320
Enzymes [BR:
sami01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAMIE_1006320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SAMIE_1006320
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SAMIE_1006320
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_Gly3P_dh_N
NAD_binding_2
F420_oxidored
DAO
2-Hacid_dh_C
Pyr_redox_2
Sacchrp_dh_NADP
AlaDh_PNT_C
NAD_binding_8
UDPG_MGDP_dh_N
XdhC_C
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
BBD97131
UniProt:
A0A494VZ35
LinkDB
All DBs
Position
complement(744076..746250)
Genome browser
AA seq
724 aa
AA seq
DB search
MKTIRFDIDADGIATLVIDVPGQSMNVIGPDLLADLDTAITRIGSEDSIKGAVIASGKDS
GFMAGMDLKYFGSMLATGNGERPAPADIFDRVFVLNRLLRRLETCGKPVACAIEGTCVGG
GFELALACHRRFVGDSSKTQLGLPEILIGLFPGGGGSQRLPRVMGVQAALMYMLQGKLFR
PAEAAMLKVVDAVVPQGTALDAAREWVKANPTASTQPWDVKGFKVPGGAGGFNPAFVQTM
AGALPMTLKQTQRNMNAPIALLSAVYEGITLPMDRAIQIESKYFAKVAADPQASNMIRTL
FVNKQAAERGARRPKDEAKAPTRKLAMLGAGMMGAGIATVAAQAGMEVVLFDRDLAYAEK
GKAHVEEVLKKRLGKSMTPEKMAETLARVTPTTDYAALAGSDFVIEAVFEDVAIKAEVTK
QVEAVLGADTIFGSNTSTLPITKLAQAWSRPENFIGIHFFSPVEKMPLVEIILGEKTGPA
AIAKALDFVAQIRKTPIVVHDSRGFYTSRSFGTYVQEGAEMVGEGINPALIENAGKQLGM
PTGPLAVSDEVSIELGVKIMTAAKKELGDAYVPQASDDVALKMVEAGRLGRKNGKGWYDY
PEGGKKHLSPQIGEMFPRALHQPDVEAVKERLLYRQLIECARCFAEGVLETPEDGDIGAI
FGWGFAPYTGGPFSHMDTVGIAQVVETLDRLAREHGPRFAPTQQLRDMAASGATFYGKVS
ARAA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatccgcttcgacatcgacgccgacggcatcgccaccctcgtcatcgacgtt
cccggccagtcgatgaacgtcatcggccccgacctgctcgccgacctggataccgcgatc
acgcgtatcggctcggaagatagcatcaagggcgcggtcatcgcatcgggtaaggacagc
ggcttcatggccggcatggaccttaaatatttcgggtcgatgctggcgacgggcaacggt
gaacgccctgcccccgccgatatttttgacagggtgttcgtgctgaaccggttgctgcgc
cgcctcgaaacctgcggcaagccggtcgcatgcgccatcgagggcacatgcgtaggcggc
gggttcgagctggcgcttgcctgccaccgccggttcgtcggcgacagcagcaagacgcag
ctcgggctgccggaaatcctgatcggccttttccccggcggcggcgggtcgcagcggctg
ccgcgcgtcatgggcgtgcaggcggcgctgatgtacatgctacagggcaaactgttccgc
ccggcggaagcggcgatgctgaaggtcgtggacgcggtcgtcccgcagggcacggcgctc
gacgccgcacgcgaatgggtgaaggcgaaccctaccgccagcacccagccatgggacgtc
aagggcttcaaggtgccgggcggcgcgggtggcttcaaccctgcgttcgtgcagacgatg
gcgggggcgctgccgatgacattgaagcagacgcagcggaatatgaacgcgcccatcgcc
ctgctgtccgccgtctatgaaggcatcactctgcccatggatcgcgcgatccagatcgag
agcaaatatttcgcgaaggtcgccgccgatccgcaggcgtcgaacatgatccgcaccctc
ttcgtcaacaagcaggccgccgagcgcggggcgcggcgtccgaaggacgaggcgaaggct
ccgacgcggaagctcgccatgctgggcgcgggcatgatgggtgcgggcatcgctaccgtc
gccgcgcaggcggggatggaggtcgtgctgtttgaccgcgacctcgcctatgctgaaaag
ggcaaggcgcatgtcgaggaagttctcaagaaacgtctgggcaagagcatgacgcccgag
aagatggcggaaacgctcgcccgcgtgacgccgaccaccgactatgcggcgctcgcaggc
agcgacttcgtgatcgaggccgtgttcgaggatgtggcgatcaaggcggaggtcacgaaa
caggtggaggcggtgctgggcgccgacaccatcttcgggtcgaacacttccaccctgccg
atcacgaaactggcgcaggcgtggagcaggccggaaaatttcatcggcatccactttttc
tctccggtcgagaagatgccgcttgtggagatcatcctaggcgaaaagaccggccccgcc
gccatcgccaaggcgctggatttcgtggcgcagatcaggaaaacgcccatcgtcgtgcat
gacagccgcggcttctacacctcgcgcagcttcggcacctatgtgcaggaaggcgcggaa
atggtgggcgaagggatcaaccccgcgctcatcgagaatgctggcaagcagttgggtatg
ccgaccggccctctggcggtcagcgatgaggtgtccatcgagctgggcgtcaagatcatg
acggcggcgaagaaggaactgggcgacgcctatgtgccgcaggcgtccgacgatgtcgcg
ttgaagatggtcgaggccgggcggctgggccgcaagaacggcaagggctggtatgactat
ccagagggcgggaagaagcacctgtctccgcaaatcggcgagatgtttccgcgcgcgctg
caccagcccgatgtcgaggcggtgaaggaaaggctgctctatcgccagttgatcgaatgc
gcccgctgctttgcggaaggcgttctggagacgcccgaggatggcgacatcggcgcgatc
ttcggctggggctttgcgccatacacgggcgggcctttcagccatatggacacggtcggc
atcgcgcaggttgtcgagacgctcgaccggctggcgcgcgaacatgggccgcgcttcgcg
cccacacagcaactgcgcgatatggcggcgagcggcgccaccttttacggcaaggtcagc
gccagggccgcatga
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