Sphingobium amiense: SAMIE_1009860
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Entry
SAMIE_1009860 CDS
T06684
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sami
Sphingobium amiense
Pathway
sami00300
Lysine biosynthesis
sami00470
D-Amino acid metabolism
sami01100
Metabolic pathways
sami01110
Biosynthesis of secondary metabolites
sami01120
Microbial metabolism in diverse environments
sami01230
Biosynthesis of amino acids
Module
sami_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMIE_1009860
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMIE_1009860
Enzymes [BR:
sami01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAMIE_1009860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBD97485
UniProt:
A0A494WAJ1
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All DBs
Position
1164443..1165672
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AA seq
409 aa
AA seq
DB search
MKPMGPIPAWFASEEGMLLIGGCGAASLIDEAGDTPLFVYDMGIVEAQVRRFRDAMPKAV
DLHYAIKANPYAPLLTRMAGQVDGFDIASGGELAMALEAGMAPDRISFAGPGKRDDELEA
AIFAGVTLNLESEGEGRRALAIADRIGKTPRLAVRVNPDFDLKGSGMRMGGGAKPFGVDA
DRAAALARAVIAGGADWRGWHIFAGSQNLDAMAIIETQAATMALAARLSDEVGASPPLVN
LGGGFGLAYFPGDEPLDIRPIGVALGTALEERADILRDSRFALELGRWLVGEAGVYLTRV
IDVKISQGETFVVVDGGLHHQLAASGNFGTVVRRNYPIAVANRFGALPADPVTVVGCLCT
PLDRLGDRVALPQVQEGDLVAVFLAGAYGASASPAAFLGHPSPRQLLLG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgggaccgatcccggcctggttcgccagcgaggaggggatgctgctgatc
ggcggatgcggcgcggcgagcctgatcgacgaagcgggcgacacgcctctcttcgtctac
gacatgggcatcgttgaagcgcaggtccgccgcttccgcgacgccatgccaaaggcggtc
gacctgcactacgcgatcaaggccaacccctatgccccgctgctgacgcggatggcaggg
caggtcgacgggttcgacatcgcctcgggcggcgaacttgcgatggcgctggaggcggga
atggcgccggatcggatcagttttgccggccccggcaagcgcgacgacgaactggaagcc
gcgatcttcgctggcgtcaccctcaacctcgaatccgaaggggagggccgccgcgcgctc
gccatcgccgaccgcatcggcaagacgccgcgcctcgcggtgcgggtgaacccggacttc
gatctcaagggatcgggaatgcgcatgggcggcggtgccaagcccttcggcgtggatgcc
gaccgcgccgccgctctggcccgagcggtgatcgcgggcggggcggactggcggggctgg
catatcttcgccggcagccagaatctcgacgccatggcaatcatagagacgcaggcggcg
acgatggcgctggccgcgcgcctctccgacgaagtgggcgcgtcccctccgctcgtcaat
ctgggcggcggctttggcctcgcctatttccccggcgacgaaccgctcgacatccgcccc
atcggcgtcgcgctcggcaccgcgctggaggagcgggccgacatcctgcgcgacagccgg
ttcgcgctcgaactcgggcgctggctggtgggggaggcgggcgtctacctcacccgcgtc
atcgacgtgaagatcagccagggtgaaaccttcgtcgtggttgacggcggcctgcatcac
cagctcgccgccagcggcaatttcggcacggtcgtgcggcgcaactatccgatcgcggtc
gccaaccgcttcggtgcgctgcctgccgatccggtcacggtggtggggtgcctgtgcacc
cccctcgaccggctgggggaccgcgtggctctcccgcaggtgcaggaaggcgacctcgtc
gcggtcttcctcgccggagcctatggcgcgtcggccagtcccgcagcgtttcttggccac
ccaagtccccgtcagcttttacttggctga
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