Sphingobium amiense: SAMIE_1010170
Help
Entry
SAMIE_1010170 CDS
T06684
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sami
Sphingobium amiense
Pathway
sami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMIE_1010170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1010170
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMIE_1010170
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAMIE_1010170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BBD97516
UniProt:
A0A494W2G4
LinkDB
All DBs
Position
1199257..1199991
Genome browser
AA seq
244 aa
AA seq
DB search
MPSLATSAIICAVRQHGEYGAIARLLTPGHGLLPGYVRGGRSRAARPVLLPGNVVMAEFR
ARTDDQLAGLTVELAHSRAPLHGEPLPAAAIEWSCALTAVALSEGTPHPALHQALSGLLD
AVEAAPAARGWAAALVRYEMLLLAEMGFGLDLTRCAATGEAVDLAFVSPRSAAAVSRAGA
LGYESRLLPLPPFLLEGGMGDWDQIIDGLRLTGFFLERSILTDRRADVLAGRERLVQRLK
RAVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgctcgccacttccgccatcatctgcgccgtgcgccagcatggcgagtatggc
gcgattgcgcggctgctgacgcccggtcacgggctgctgcccggctatgtgcgcggcggg
cggtcacgggctgcgcgacccgtgctgctgccgggcaatgtggttatggcggaatttcgg
gcgcggacggacgatcagcttgcgggcctgacggtggaactggcgcatagccgcgcgccc
ctccatggcgagccgcttcccgcggccgcaatcgaatggagttgcgcgctgacggcggtg
gcgctgtcggagggaacgccgcacccggcgcttcatcaggcgctgtccggcctgctcgat
gcagtggaagccgcgcccgccgcacgcggatgggctgcggcgctggtgcgatatgagatg
ctgctgctggcggaaatgggctttggcctcgatctgacgcgctgcgcggcgacgggggag
gcagtcgacctcgccttcgtcagcccgcgcagcgccgccgcggtcagccgtgccggggcg
ctgggttacgaaagccgccttctgccgctcccgccctttctgctggaagggggcatgggc
gactgggaccagattatcgacggactgcgcctgaccggcttcttcctcgaacgctcgatc
ctgaccgaccgccgcgccgatgtgctggccgggcgcgagcgactggtccagcgcctcaaa
agggcggttgcgtga
DBGET
integrated database retrieval system
