Sphingobium amiense: SAMIE_1010980
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Entry
SAMIE_1010980 CDS
T06684
Name
(GenBank) conjugal transfer protein TraD
Organism
sami
Sphingobium amiense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
T4SS-DNA_transf
TraG-D_C
AAA_16
AAA_19
AAA_22
FtsK_SpoIIIE
DUF87
AAA_5
AAA_30
AAA_7
Zeta_toxin
PIF1
nSTAND3
IstB_IS21
DUF815
AAA_28
AAA
AAA_24
bpMoxR
RuvB_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBD97597
UniProt:
A0A494W4R8
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Position
1280403..1282553
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AA seq
716 aa
AA seq
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MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFFQTVLAGLILWLMGTCWYAFEKSTDYQRFV
LAKLVEATIKADAAPGTNDPVLFRTPDGRQYWTSADTLADSGVAKQALHKLEKDLIHGAA
IAGVVALFGLVSAWFYFTRTGKGLGSNEYLRGARFGTASEVRRALRGQKKGALTIGGVAV
PEAFEPEHILLVGAPGTGKTNLITTMLEGIRKQGKRAIVYDTAGSFVEKFYRPGRDILLN
PLDKRTDIWSPWVDVPREYHYDQIAESTIPDKHGDPFWSKAARGTLVAVLRKLARQKHTL
ISVLLDRVLRSPLADLAAYVKGTDAAAFISAEGERTSAGVQAELASVMRSFAYLDDTEDG
FSIRRWVEDEKDDSWLFVTVKADQLPSLRPLITVWLDIAISAIMSLTPDRDRRLYCVIDE
LPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLTATYGKEDAAAITGYCSTWVALRAND
SDTSELISKNLGRVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVLDTEVTHLPNLSGF
LRFGRNLPVVRFTDRFNPLPSIAAAFVERTEPPKRLPLGKAIISQAWAERRARQAREEAA
RRGQGPGHPDTPPSPGTGQGDLFTGEANPPPAREPTQEPPSLPDPQDAVPQDEVFGPTDH
SDSGMTDEGAPIDDHPDEENRVATPIPLLGATRGTIRVRLDSHGRSEGPREKAKPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcttccgcaacgacacgttggggagctggacgcggggcgggcaggcgatcgtc
cacaatgtccgcatgaccacccaggtctttttccagaccgtgctggccgggctgatcctc
tggttgatggggacctgctggtatgcgttcgaaaagtcgaccgactatcagcgcttcgtc
ctcgccaagctggtggaggcgaccatcaaggcggatgcggcgccggggaccaatgacccg
gtgctgttccgcacccccgacgggcgccaatactggacctcggccgacaccctcgccgac
tccggtgtcgcgaagcaggcgctccacaaactcgaaaaggacctcatccacggggcggcc
attgccggtgtggtcgccctcttcggactggtcagtgcctggttctattttaccagaact
gggaaggggctcggctccaacgaatatctgcgcggcgcccgcttcgggacggcctcggaa
gtgcggcgcgcgctccgggggcagaagaagggggcgctcacaatcggcggcgtcgccgtg
ccggaagccttcgagcccgaacatatcctgctggtcggcgctccaggaacgggcaagacc
aacctcatcaccaccatgctcgaaggcatccgcaagcagggtaagcgggcgatcgtctat
gacacggccgggagcttcgttgagaaattctatcgccccggcagggacatcctgctcaac
ccgctcgacaagcgcaccgacatctggagtccctgggtcgatgttccgcgggagtatcat
tacgaccagatcgcggaatctacgatccccgacaaacatggcgatccgttctggagcaag
gccgcgcgcggcacgctggtcgccgtcctgcgcaagctcgcgcggcagaagcacacgctc
atctcggtcctgcttgatcgggtgctgcgttccccgctcgccgatcttgccgcctatgtg
aagggcaccgatgccgccgctttcatctccgccgagggagagcgcacctcggccggcgtc
caggccgagcttgcctcggtcatgcgcagcttcgcctatctcgacgataccgaggacggc
ttctcgatccggcgttgggtcgaggacgagaaggacgacagctggctgttcgtcaccgtc
aaggccgaccagcttccttcgctgcgccccctgatcacggtctggctcgacatcgcgatc
agcgcgatcatgagcctcacgcccgaccgcgaccggcggctctattgcgtcattgacgaa
ttgccgacgctccagaagctccccagcctatccgacttcctcgcccgtgcgcgcaaatat
ggcggctgcggcatattggggttccagtcctatccccagctgaccgcgacctacggcaag
gaggatgcggcggccatcaccggctactgctcgacctgggtcgcgctccgggcgaacgat
agcgacacctcggaacttatctccaaaaaccttggccgggtcgagcaggtcgaagccaac
gaggggatgagctacggcgtcaatgacatgcgcgacggggtgaacctcagtcgcatgcag
gtgacccgcccgctggttctggacaccgaggtcacccatctgccgaacctttcgggtttc
ctccgtttcgggcgcaatctccccgtcgtccgtttcaccgatcgcttcaatccgctgcct
tcgatcgcggccgcgttcgttgaacgcaccgagccccccaaaaggctgccgctcggcaag
gccatcatctcccaggcgtgggcagagcgccgcgcgcgccaggcgcgggaggaggccgcg
aggcgagggcagggtccgggacatccggacacgccgccgtctcccggaacggggcaaggc
gatctttttaccggcgaggccaatcccccgccggcgcgggagccgacccaggagccgccc
agcctgccggatccccaggacgccgtgccgcaggatgaggtgttcggacccaccgaccac
agcgattccggcatgacggacgagggagcgccgatcgacgatcatcccgacgaggagaac
agggttgccacccccatccccttgttgggggcgacgcgcggcacgatccgtgtgcggctc
gacagccatggccgttccgaaggcccgcgtgagaaggcgaagccggcatga
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