Sphingobium amiense: SAMIE_1011080
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Entry
SAMIE_1011080 CDS
T06684
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
sami
Sphingobium amiense
Pathway
sami02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMIE_1011080
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sami01001
]
SAMIE_1011080
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sami02022
]
SAMIE_1011080
Enzymes [BR:
sami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SAMIE_1011080
Protein kinases [BR:
sami01001
]
Histidine kinases
LuxR family [OT]
SAMIE_1011080
Two-component system [BR:
sami02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
SAMIE_1011080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
HATPase_c
PAS_4
HisKA
PAS_8
Diguanyl_cycl_sensor
PAS_3
HATPase_c_5
Asp_DH_C
FlK
HATPase_c_2
HATPase_c_3
DUF2142
Imm30
Motif
Other DBs
NCBI-ProteinID:
BBD97607
UniProt:
A0A494W4S6
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Position
1302767..1304590
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AA seq
607 aa
AA seq
DB search
MTASLAGLAIAVIAVVTRWQLGRQIDESVHYFVSLGVAGMVLVALRPDIVVLAGVTLVTL
TTLAIVDGWPTVAEQWVALFLFLAAMALLWRNHHRTLSRARDLADGTRMLAAELNLLIDG
AEDYAIYMLDAEGRVTIWNGGAERLKGWTEAEMAGQLTDRFYPADVVASGKPTSLLAEAQ
HRGKIEIDEWQIRKDGSEFLAHISITALKKPDGSLGGFATIVHDITDQRATLSSLRNSEA
HLRSILSTVPDAMIVIDEGGTMVSFSTAAERLFGYTQEEVLGSNVSMLMPSPYRERHDGF
LERYLRTGERRIIGIGRVVFALRKDGTTFPMELSVGEAAGESQRLFTGFIRDLTDRQRTQ
ERLEQLQSELIHVARVSAMGTMASTLAHELNQPITAVANYLEAVRDLLDQPDPDDLPDIR
EALTDAAGEAMRAGHIVRRLRDFVARGEVEKTVENLPNLINEAAAFGLMGAGEKSIETRM
DIDHEAATVLVDKVQIQQVLVNLIRNAVEAMNARARPVLTIRTGPDQAGFVRVTVSDTGT
GMAPEVAAQLFKAFVSTKSDGMGLGLSICRTIVEANGGRIWMEPAEGGGTQFHFTLVRAD
REQSYGG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgcgtcccttgcgggactggctatcgccgtcatcgcggtggtcacacgatggcag
cttggccggcagatcgacgagagcgttcattatttcgtctctctcggcgtggccggtatg
gtgctcgtggcgctcaggccggatatcgtggtgttggcgggcgtcacgctcgttaccctt
acgacgctcgcaatcgttgacggttggccgaccgtggcagaacagtgggttgccctgttc
ctgtttctcgccgccatggctctgctttggcggaatcaccatcgtactctctcacgcgct
cgcgatctcgcggacgggacgaggatgctggccgcagaactgaacctgctcatcgatggg
gcggaagattatgcgatctatatgctcgatgctgaaggacgggtcacgatctggaacggg
ggcgccgagcgtctgaaaggctggacagaggccgagatggccggccagcttacagatcgg
ttttatccggccgatgtcgtcgccagcggcaagccgacgtccttgcttgccgaagcacaa
caccgtggcaagatcgagatcgacgagtggcagattcgtaaggatggcagtgagtttctg
gctcacatttccatcaccgcgttgaaaaaacccgacggatcgttgggcggtttcgcgaca
attgtccacgacatcaccgaccagcgagcaacgctgagctctcttcgcaacagtgaagcg
catcttcgttcgattttgtcgacggtccccgatgcaatgatcgtcatcgatgaaggcggc
acgatggtgtcgttcagcacggcggccgagcgtttgttcggttacactcaggaggaagtc
ctgggttccaatgtcagcatgttgatgccctcgccttatcgcgaacgccatgacggtttt
ctcgagcgctatctgcgtacaggagagaggcgcatcatcgggatcggacgcgtggttttt
gcactgcgaaaggatgggacgaccttcccgatggagttgtcggttggagaagcggccggc
gagagccagcggctgttcaccggcttcattcgcgatctgacggatcgccaaaggacacag
gagcggctagagcagcttcaatccgaactgatccacgtcgcgcgcgtcagcgcgatgggg
acgatggcgtcgacgctcgcccatgagctgaatcagccgatcaccgccgtagccaactat
ctcgaagcggtccgggacctgctcgaccagccagatcccgatgatctgcccgacatccgg
gaggcgctgacagacgccgcgggggaagcgatgcgcgcgggtcatatcgtgcgccgtttg
cgtgatttcgttgccaggggggaggtcgagaagactgtcgagaacttgcccaacctcatt
aacgaagcggctgccttcggcctgatgggcgcgggcgagaaatcgatcgaaacccgcatg
gacatcgatcacgaagctgcgacggtcctcgtcgataaggtccagatccagcaggtcctc
gtgaacttgatccgcaatgcggtcgaggccatgaatgcgcgcgccaggcctgtgctcacc
atccgcaccggtcccgaccaggcgggttttgtgcgtgtcacggtgtccgataccggcacg
ggaatggcccccgaggtcgctgcccagctcttcaaggcctttgtcagcaccaagtcggac
ggcatggggttgggtctctcgatttgtcgaacgattgtcgaagccaatggcgggcgcatc
tggatggagcctgcggaagggggcggcacgcaattccatttcacactggtcagggcagat
agggagcaatcttatggaggataa
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