Sphingobium amiense: SAMIE_1012220
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Entry
SAMIE_1012220 CDS
T06684
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sami
Sphingobium amiense
Pathway
sami00550
Peptidoglycan biosynthesis
sami01100
Metabolic pathways
sami01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMIE_1012220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMIE_1012220
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
SAMIE_1012220
Enzymes [BR:
sami01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SAMIE_1012220
Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SAMIE_1012220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bMG1
Motif
Other DBs
NCBI-ProteinID:
BBD97721
UniProt:
A0A494W0L2
LinkDB
All DBs
Position
complement(1428725..1430794)
Genome browser
AA seq
689 aa
AA seq
DB search
MKFPGLKSKTLTEASQTLTFSRRAMVVGGIQGLIGATLIGRMAWISVAENEKYSLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPQRLVDADATIRQLAQLLKLETDDVD
RIREELEKSAGFRPVQVADKLSYDQYAAISVRLPDLPGVAPSQGFSRNYPAGAAVGHLLG
YVGAATAEDYKARRDPLLITPGFKVGKDGLEKTFDRPLTGKPGAKRVEVTARGKIMRELT
TRPDSPGRSIKLTIDAGLQEFAGRRLATQSGSVVVIDCHSGDVLALASMPSFDPNSFSDG
ISHLEYEMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGISPAETVSCGGAIRVG
NTLFHCHKRRGHGPLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFDLPFPS
QSYGTVPDPAWKERKYKQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGKQLMPNFL
FGAPHAAPQPVGVSEEHLVVIRDAMNAVVNGGGTGGAARSSIPGVMIAGKTGTAQVRRIT
MTERAGGVRGNAGLPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHINRVEDAPMIASDT
LSYLFDPAKAMEKLETLEKDWGGTPAERQAKQMAAFRLAKAIEKGEAPPPAAPEAANAAA
DASAAPASAPDPEASDLPAPPGSNATDAP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcccggcctcaagagcaagaccctcaccgaagcatcgcagaccctgaccttc
agccgccgggcgatggtggtcggcggcattcagggtctgatcggcgcgaccctgatcggc
cgcatggcgtggatcagcgtggcggagaatgagaaatacagccttctgtcggaaagcaac
cgggtcaacctgacgctcattccgccgcgtcggggctggatcatcgaccgcaacggacgc
ccgctcgccaacaaccgcaccgactttcgcgtcgacctgatcccgcagcggctggtggat
gccgacgcgacgatcaggcagctcgcgcaactgctgaagctggaaacggacgatgtcgac
cgcatccgcgaggagctggagaaatccgccggtttccgcccggtgcaggtggcggacaag
ctgagttacgaccaatatgccgcgatcagcgtgcgcctgcccgacttgcccggcgttgcg
cccagtcagggtttttcccgcaactatcccgcaggggcggcggtcgggcatctgctgggc
tatgtcggcgcggcgacggcggaagactacaaggcgcgccgcgaccccctgctcatcacg
ccggggttcaaggttggcaaggacgggcttgaaaagacgttcgaccgcccgttgacgggc
aaacccggagccaagcgcgtcgaggtgacggcgcgcggcaagatcatgcgtgaactcacc
acccggccggattcgccgggccggtcaatcaagctgaccatcgacgcggggctgcaggaa
tttgccggccgccgcctcgccacccaaagcggatcggtggtggtgatcgactgtcatagc
ggcgacgtgctggcgctcgcgtcgatgcccagcttcgaccccaacagcttttccgacggc
atcagccatctggaatatgagatgctgtcgaaggacgatcacgtccccctgcgtaacaag
acgttgcagggtctctatccgcccggatcgaccgttaaacccatggtggcgctggcgctg
ctggaagcgggcatatcgccggccgagacggtcagttgtggcggcgcgatccgtgtcggc
aacaccttgttccactgccataagcggcgcggccacggcccgctcaacatgcgcggcgca
atcgcgcagagctgcgacatctatttctaccagatggcccagcgcatcggcatggaccgc
atcgccagcatggcgcggcgcgtgggcatggggcagaaattcgacctgcctttccccagc
cagagctacggcaccgtgccggacccggcgtggaaggagcggaaatacaagcagaagtgg
caggtctacgacacggtcaacgccaccatcgggcagggttatatgctcatcaacccgctc
cagatggcggtgatggccgcgcgcctcgccaccggcaagcagttgatgcccaacttcctg
ttcggcgccccccatgccgcgccgcagccggtcggcgtcagcgaggagcatctggtcgtc
atccgcgacgcgatgaacgctgtggtcaacggcgggggcacgggcggcgcggcgcgcagc
tccatccccggcgtcatgatcgcgggcaagaccggcaccgcgcaggtccgccgcatcacc
atgacggagcgcgccggcggcgtgcgcggcaatgcggggctgcccttcaagctgcgcgac
catgccctgtttcaggggttcgcgccgttcgacaatccgcgctacgccatcgcctgcatc
atcgaacatggcggccacatcaaccgggtcgaggacgcgccgatgatcgcgagcgatacg
ctgtcctatctgttcgatccggccaaggcgatggaaaagctggaaacgctggaaaaggac
tggggcggaacgcccgcagagcggcaagcgaagcagatggcggcattccgcctcgccaag
gctatcgagaagggcgaagcgcctccacccgctgcgcccgaggcggccaacgccgctgcc
gacgcgtcggcggccccggcgtccgcgcccgatcctgaagccagcgacctgcccgccccg
cccggctccaacgcgacggacgcgccatga
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