Sphingobium amiense: SAMIE_1015250
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Entry
SAMIE_1015250 CDS
T06684
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sami
Sphingobium amiense
Pathway
sami03030
DNA replication
sami03430
Mismatch repair
sami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMIE_1015250
03430 Mismatch repair
SAMIE_1015250
03440 Homologous recombination
SAMIE_1015250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sami03032
]
SAMIE_1015250
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1015250
Enzymes [BR:
sami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMIE_1015250
DNA replication proteins [BR:
sami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMIE_1015250
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMIE_1015250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BBD98024
UniProt:
A0A494W023
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All DBs
Position
complement(1784142..1784852)
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AA seq
236 aa
AA seq
DB search
MILGYDTETTGLPDWHQPSDAPHQPHVIQIAMICQTMDGTEIDRFVSIVKPGPGAVMEPK
AFEAHGITLEQAMDEGVDPVEVTDRFIDWAGKAQLMVGHNESFDRRLMRIMAARHKGFKW
EPTCPNFCTLYRSKFVLNLPATPRMIATGMPGPKAPNLGECVQHFFGETLEGAHDAAVDI
EASLRVMWHLINEVGVPMFKATRSTGGRPAPRRSSPARQASGDPFAAAAALLGGSK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgatccttggctacgatactgagacgacgggcctacctgactggcaccagccttccgac
gccccgcatcagccccacgtcattcagatcgcgatgatctgccagacgatggacggcaca
gagatcgatcgcttcgtcagcatcgtgaagccgggccccggcgctgtcatggagcccaag
gctttcgaagcccacggcatcacgctcgagcaggcgatggacgagggcgtcgatcccgtc
gaggtgacggaccgcttcatcgactgggcgggcaaggcgcagctgatggtcggccataac
gaatccttcgaccgtcggctgatgcggatcatggcggcgcggcacaaaggcttcaaatgg
gagcctacgtgtccgaacttctgcactctctacaggtcgaagttcgtcctcaatctcccg
gcgacgcctcgaatgatcgcaacagggatgcccggaccgaaggcgcccaacctgggcgaa
tgcgtgcagcacttcttcggcgaaacgctggaaggcgcgcacgacgctgcggtcgatatt
gaagcctcgctgcgggtcatgtggcatctcatcaacgaggtgggtgtgccgatgttcaag
gcgacgcgttcgaccggcgggcggcccgcgccgcgccggtcctctccggcgcgccaagcc
agcggcgaccccttcgccgccgctgccgccctgcttgggggttcaaagtga
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