Sphingobium amiense: SAMIE_1015920
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Entry
SAMIE_1015920 CDS
T06684
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sami
Sphingobium amiense
Pathway
sami00071
Fatty acid degradation
sami00362
Benzoate degradation
sami00650
Butanoate metabolism
sami01100
Metabolic pathways
sami01120
Microbial metabolism in diverse environments
sami01200
Carbon metabolism
sami01212
Fatty acid metabolism
Module
sami_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAMIE_1015920
09103 Lipid metabolism
00071 Fatty acid degradation
SAMIE_1015920
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAMIE_1015920
Enzymes [BR:
sami01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAMIE_1015920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
F420_oxidored
Pyr_redox_2
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
BBD98091
UniProt:
A0A494W1L6
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All DBs
Position
complement(1852854..1854896)
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AA seq
680 aa
AA seq
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MIETQRHGTVLTIRIGNPPVNALSEDVRRGIYQAIDAAQSDDGVSAIVIHGAGRMFSAGA
DITEFGKPLAEPGLAVVIDAIEASAKPVVAAIHGSALGGGLEVALGAHYRVATASAKLGL
PEVALGLLPGAGGTQRLPRLVGIPAALDMIVSGSPISGTKALDIGLVDKVVPEASLVEDA
IAYAATLDAPRPTGTRAVSFEGGEFERFAEQNARKIKGLDAPQACIEAVRAATSLPLAEG
QEKERSLFHTLMGGAQSKALRHAFFAERAAAKIDGLPKDVALRPIEKVGVIGAGTMGGGI
SMNFLSAGIPVTIVEMVQEALDRGTGLMRKNYEATAAKGRMTSAQVEGALALLTPTLDFN
ALSECDLIIEAVYENMDVKKEIFARLDGIAKPGAILASNTSYLSVDEIAQATKRPEDVVG
LHFFSPANIMKLVEVVRGEKTAPDVLATGMATARKIGKVPVVSGVCFGFIGNRMLDPRLE
GAMEMLLEGATPDQIDRVSVAFGMPMGPLQMIDLAGVDIGWHRDPTRIESLRDALNAVGR
WGQKAGGGFYDYDEKRRHLPSPVASGIIDDYRAKAGVTPRAISDEEIMVRTMHVMVNEGA
KILSEGIAQRSSDVDVVWIYGYGWPRHTGGPMFWAEQVGLAKIVADLERYADRLGEGFSL
SPLLAEAARSGRSLDEARAG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaacgcaacgccatggcaccgtcctcacaatccggatcggcaatccgcccgtc
aacgccctgtcggaagatgtgcggcgcggcatctatcaggctatagacgcggcccagagc
gatgacggtgtgtccgccatcgtgatccacggggcagggcggatgttcagcgcgggcgca
gacatcaccgaattcggcaagccgctcgccgagccgggcctcgcggtggtgatcgacgcc
atcgaagccagcgccaagccggtcgtcgccgccatccatggttccgcgctcggcggcggg
ctggaggtggcgctgggcgcgcattatcgcgtcgcgaccgcgagcgcgaagctcggcctg
ccggaagtcgcgctgggcctgctgcccggtgcgggcggcacccagcggctcccccgcctt
gtcggcatccccgccgcgctcgacatgatcgtgtcgggcagcccgatttccggcacgaag
gcgctggacatcggtctggtggataaggtcgtgccggaagcgagtctggttgaagacgcc
atcgcctatgccgccacactcgatgcgccgcgtccgaccgggacgcgcgccgtttccttc
gaggggggcgagttcgagcggttcgcggaacagaatgcgcgcaagatcaaggggctggat
gcaccgcaggcctgcatcgaggcggtccgggcggcgactagcctgccgctcgccgagggg
caggaaaaggaacgcagccttttccacacgctcatggggggggcgcagtcgaaggcgctg
cgccatgccttcttcgccgagcgcgccgccgcaaagatcgacggcctgcccaaggatgtc
gcgctgcggcccatcgaaaaggtcggcgtgatcggtgcgggcacgatgggcggcgggatt
tccatgaatttcctgtctgccgggattccggtcaccatcgtcgaaatggtgcaggaagcg
ctcgatcgcggcaccggcctgatgcggaaaaattatgaggccaccgccgccaaggggcgc
atgaccagcgcccaggtcgaaggcgcgctggcgctgctgacgccgacgctggatttcaac
gccctgtctgaatgcgacctcatcatcgaggccgtttatgaaaatatggacgtgaagaag
gagattttcgcgcggctggacggcatcgccaagccgggcgcgatcctcgcgtccaacaca
tcctacctgtcggtcgatgaaatcgcgcaggcgaccaagcggccggaggacgttgtcggg
ctgcacttcttctcgcccgccaatatcatgaagctggtcgaggtggtacgcggcgagaag
accgcgccggacgtgctggcgacgggcatggcgaccgcgcgcaagatcggcaaggtgccg
gtcgtgtcgggcgtctgcttcggcttcatcggcaaccggatgctggacccccggctggag
ggcgcgatggagatgctgctggagggcgcgacgcccgaccagatcgaccgcgtgtcggtc
gccttcggcatgccgatgggaccgttgcagatgatcgacctcgccggggtcgacatcggc
tggcaccgcgaccccacccgcatcgaaagcctgcgcgacgcgctcaacgccgtgggccgc
tggggccagaaggcgggcggcggcttctatgattatgacgagaagcgccgtcatcttccc
tcccccgtcgcgagcgggatcatcgacgattatcgcgcgaaggccggggtcacgccgcgc
gccatttccgacgaggaaatcatggtccgcaccatgcatgtcatggtgaatgaaggggcc
aagatcctgagcgaagggatcgctcagcgctcgtcggacgtcgatgtcgtctggatctac
ggctatggctggccgcgtcacaccggcggaccgatgttctgggcggagcaggtcggcctt
gccaagatcgtcgcggatctggaacgctatgcggaccggctgggcgagggcttctcgctg
tcaccgctcctggccgaagcggcgcgcagcggccggtcgctcgacgaggccagggccgga
tga
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