Sphingobium amiense: SAMIE_1018210
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Entry
SAMIE_1018210 CDS
T06684
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sami03016
]
SAMIE_1018210
Enzymes [BR:
sami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SAMIE_1018210
Transfer RNA biogenesis [BR:
sami03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMIE_1018210
Prokaryotic type
SAMIE_1018210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BBD98320
UniProt:
A0A494WC18
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All DBs
Position
2127226..2127990
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AA seq
254 aa
AA seq
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MTRFAFTVEYDGRPFMGWQRQAHGASVQQTVEDAIHQVTGERVAVHAAGRTDAGVHGLGM
RAHADVEKPIAPFRLMEALNAVMRPAPVAILDCVEVPGDWHARFSCIGRSYVYRIANRRA
PLTFEEGLVWRVIQPLDAQAMHAAAQVLVGRHDFTTFRSAHCQSDSPVKTLDRLDVERDG
DRIAIYAAARSFLHHQVRSMVGCLAMVGMGRWSADDLRAALEARDRAALGLNAPPDGLYF
VRAAYAGAETATRT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtttcgccttcaccgtcgaatatgatggccgccccttcatggggtggcagcgg
caggcgcacggggccagcgtccagcagaccgtcgaggacgcgatccatcaggtgacgggc
gagcgggtggcggtccacgcagcagggcgcaccgacgcaggcgtccatggccttggcatg
cgcgcccatgccgatgtggaaaagccgatcgcgccgtttcgcctgatggaagcgctcaac
gccgtgatgcggcccgcgccggtcgcgatcctagattgcgtcgaggtgccgggcgactgg
catgcgcgattttcctgcatcgggcgatcctatgtctatcgcatcgccaaccgccgcgcg
ccgctgaccttcgaggaagggctggtatggcgggtgatccagccgctcgatgcgcaggcg
atgcacgcggcggcgcaggtgctggtggggcggcatgacttcaccacattccggtcggcg
cactgccagtcggacagcccggtcaagacgctcgaccggctggatgtggagcgtgacggc
gaccgcattgcgatctacgcggcggcgcggtccttcctccaccatcaggtgcggtcgatg
gtcggctgcctcgcgatggtgggcatggggcggtggagcgcggacgatctgcgcgcggcg
ctggaggcgcgggaccgcgcggcgctgggcctcaacgcgccgccggacgggctgtatttc
gtgcgcgcggcctatgccggagcggagacggcgacgcggacctga
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