Sphingobium amiense: SAMIE_1021470
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Entry
SAMIE_1021470 CDS
T06684
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sami02000
]
SAMIE_1021470
Transporters [BR:
sami02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMIE_1021470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBD98646
UniProt:
A0A494W5P9
LinkDB
All DBs
Position
complement(2507806..2509620)
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AA seq
604 aa
AA seq
DB search
MAVLAATPALAQDDNIVVTAAGIEQPRDEVGQAITVIDAKTIETRQAVDVVDLLATTPGV
RFNRNGSVGSVTGVSLRGAETTQTLVLIDGVKVNDPSGIGDGYDFGPLLTANVRRIEVLR
GSNSVVHGSQAIGGVVNIMTGVPAQGFGANASVEYGYSDTWSAKADVSGSSGIASGGVGA
AYFRTDGISSAAGGTERDGTKNIATNARLKLAFSDALSLDLRGYYIHADLDYDSFFGAPA
DSSDVSKLDQYVGYAGLNLSLMDGRLTQRAAVTWLRNDRDYYFVPATDPDYGYKGTNLRF
EYEGVYAPVDAAKFILGYEHERPDYDFFGFGSTDSARINIDSVYGLAIVKPLEGLAVTGG
VRHDDHSQFGGATTFGANANYSPNAGATNVRLSYGEGFKAPSLYQLYDSFSGNAALRPER
SKSYDVGFDQRLDDGRATLSLTAFRRDTRNQINYDNATFTYGNLDRTRAKGVEASVALKP
VEALTVTGSYSYIDARDRSRGSANFGNRLARRAVNQVSVSADYDWSFGLSTGATVTMVGD
SFDNAANTRRLDGYALVGVRASLPIGEHLEIYGRIDNLTDEAYATAYGYSTYGRSAYGGV
RVRF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtgctggccgccacgccggcgctggcgcaggacgacaatatcgtcgtcaccgcc
gccggaatcgaacagccgcgcgacgaggtcgggcaggcgatcaccgtcatcgacgcgaag
accatcgaaacgcggcaggcggtcgacgtggtcgatctgctggcgacgacgccgggcgtc
cgcttcaaccgcaacggatcggtcggcagcgtgaccggcgtgtcgctgcgcggcgcggag
acgacgcagacgctcgtgctgatcgacggggtcaaggtcaacgacccgagcggcatcggc
gacggttatgatttcggcccgttgctgaccgccaatgtccgccgcatcgaagtgctgcgc
ggatcgaactcggtcgtccatggcagccaggccatcggcggcgtcgtcaacatcatgacg
ggcgttccggcgcagggcttcggcgccaacgcttccgtcgaatatggctatagcgacaca
tggagcgcgaaggcggacgtgtcgggcagcagcggcatcgcatcgggcggcgtgggcgcg
gcctatttccgcaccgacggcatatcctctgcggcgggcggcacggagcgcgacgggacg
aagaatatcgccaccaacgcgcggctgaagctcgctttttccgacgcgctgagcctcgac
ctgcgcggctattatattcacgccgacctcgattatgacagcttcttcggcgcgcccgcc
gacagcagcgacgtgagcaagctggaccaatatgtcggctatgcgggcctcaacctctcg
ctgatggacggcaggctgacgcagcgtgccgccgtcacctggctgcgcaacgaccgcgac
tattatttcgtgcccgcgaccgaccccgactatggttacaagggcacgaacctgcgcttc
gaatatgagggcgtctatgcccccgtcgatgccgccaaattcatcctgggctatgagcat
gagcggccggactatgatttcttcggcttcggatcgaccgacagcgcgcggatcaacatc
gacagcgtctatggcctcgccatcgtcaagccgctcgaaggcctcgccgtgacgggcggc
gtgcgccacgacgatcacagccagttcggcggcgcgaccacctttggcgcgaacgccaat
tattcgcccaatgccggggcgaccaatgtgcgtctgagctacggcgaagggttcaaggcg
ccgtcgctttaccagctttacgacagcttcagcggcaatgcggcgctgcggcccgagcgg
tcgaagagctacgacgtcgggttcgaccagcgccttgacgacggacgtgccaccctgtcg
ctcacggccttccgccgcgatacgcgcaaccagatcaactatgacaatgcgaccttcacc
tacggcaatctcgaccgcacccgcgcgaagggcgttgaggcttcggtggcgctgaagccc
gtggaggcgctgaccgtcacgggcagctattcctatatcgacgcgcgcgaccggtcgcgc
ggctcggcgaatttcggcaatcgccttgcgcggcgggcggtcaatcaggtgagcgtttcg
gcggactatgactggtccttcggcctgtcgaccggcgcgaccgtcacgatggtgggcgac
agtttcgacaatgcggcgaacacgcggcggctcgacggctatgcgctggtgggcgtgcgc
gcgtcgctgccgattggcgagcatctggagatttatggccggatcgacaacctgaccgat
gaagcctacgccaccgcctatggctacagcacctatggccgctccgcctatggcggcgtg
cgtgtccgcttctga
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