Sphingobium amiense: SAMIE_1022130
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Entry
SAMIE_1022130 CDS
T06684
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sami03019
]
SAMIE_1022130
Messenger RNA biogenesis [BR:
sami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMIE_1022130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_22
Rad17
AAA_18
AAA_30
AAA_28
ABC_tran
T2SSE
YfeC-like
YqbF
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BBD98712
UniProt:
A0A494WDD4
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All DBs
Position
complement(2577508..2578455)
Genome browser
AA seq
315 aa
AA seq
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MNEPKTILLLSGLSGAGKTTALKTLEDMGWEVVDNIPLVLLDRLLDTPLPEGHAGEYARP
LALGIDARTRGFDAAAIVQRIKTLRERHGHDIETLFLDCSGSELERRFAETRRRHPLALD
RPAADGIARERELTEPLRRWAGQVIDTTGTTTNALQQEIRARFSRERLSDPVLTILSFGF
SRGVPRNADLMFDMRFLRNPHWVDALRPKTGLDPEVAAYIREDPAYEDAVGRIEQLLATL
LPRYAEGGKTYITVAFGCTGGKHRSVHVAARVAKYLQAAGFSPTLLHRNIESVPQESLEK
HRPGGPKASHDTNGP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagccgaaaaccatcctgctgctgtccggcctgtcgggcgcgggcaagaccacc
gcgctcaagacgctggaggatatgggctgggaagtggtcgacaatatcccgctcgtcctg
ctcgaccggctgctcgacacgccgctgcccgaaggccatgccggggagtatgcccgcccg
ctggcgctcggcatcgacgcgcggacgcgcggcttcgacgccgccgctatcgtccagcgg
atcaagacgctgcgcgaacggcacgggcatgacatcgaaacgctgttcctcgactgttcg
ggcagcgagctggagcggcgctttgccgagacccgccgccgccaccccctcgcgctcgac
cgtcccgccgccgacggcatcgcgcgcgagcgggagctgaccgaaccgctgcgccgctgg
gccgggcaggtgatcgacacgaccggcaccaccaccaacgcgctgcaacaggaaatccgc
gcgcgattttcccgcgagcggctgtcggacccggtgctgacgatcctgtccttcggcttt
tcgcgcggcgtgccccgcaacgccgacctgatgttcgacatgcgctttctgcgcaatccg
cactgggtcgacgcgctgcggccgaagacgggcctcgacccggaggtcgccgcctatatc
cgcgaagaccccgcctatgaggatgcggtcggccggatcgagcaactgctcgccacgctg
ctgccccgctatgccgagggcggcaagacatacatcaccgtcgccttcggctgcacgggg
ggcaagcaccgctccgtccacgtcgccgcgcgcgtcgcgaaatacttgcaagcggcgggc
ttttcgcccaccctcttgcaccgcaatattgaatcggtgccccaggaaagcctggagaag
caccgaccgggaggcccgaaagcatcacatgacacaaatgggccgtag
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