Sphingobium amiense: SAMIE_1023750
Help
Entry
SAMIE_1023750 CDS
T06684
Name
(GenBank) peptidase C14
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1023750
Enzymes [BR:
sami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMIE_1023750
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SAMIE_1023750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Peptidase_C14
Helicase_C
Helicase_dom4_arc
ResIII
DEXQc_Suv3
CHAT
HemN_C
Motif
Other DBs
NCBI-ProteinID:
BBD98874
UniProt:
A0A494W2M0
LinkDB
All DBs
Position
complement(2772516..2775527)
Genome browser
AA seq
1003 aa
AA seq
DB search
MLRAAFFGIDRHRDPYVGDLTGAARDATALWAIMSDSIDGLDAQLITNEDATLEAMRAAL
DATLASADETDVVILGFAGHGTPDHRLVLHDTDVDNLPGTTFGMDELAQRFRDTRARAVI
LLLDCCFSGGAPARVLDVGLVPRNAIAFPLVDVAGQGRILFAASSAQQEALEDPQTRHGL
FTKAVIDTLLAADAPLGVLELVDRVTRLVGANAGRFGYEQSPTMFGQTQGDFMLPPGRVG
ERYRAAFPEYNALQTTGDIRELSQVGIPQEAIDAWHERFPAGLNALQIAAVNERGVLGGN
SLMVIAPTSAGKTFVGELAALKAIADGRKAVFLLPYKALVNEKFEDFSALYGERLGLRIA
RCSGDWQDQVGEVLRGKYDIAFFTYEKFLSLSVSSSHILNQIGLVVLDEAQFITEPGRGM
VVELLLTSLVSARQRGVCPQLITLSAVIGHANSFDRWLDCALLQTDERPVPLVEGVMDRT
GAFTKMGPNGAETIQMIERHRVQQRRTRPSSQDVIVPLVQHLVEAGEKVIVFRNARGPAS
GCAEYLANELGLEPALDVLDALPEGDPSAMSDSLRRALAGGVAFHNGDLTRDERVAVERG
FRSLNGNIKVLVATSTVAAGVNTPASTVIIAETDFPGRERIPYTVAQYKNMAGRAGRLGF
EAEGKSILLAETPMERNQLFRRYVQGQPEAITSSFNPNQPGTWVIRLLAQVRDVPREAVI
DLIANTYGGYLAAIQNPAWRDHMADSLERLLNRMIADGLVDEEGDSLRLTMLGRACGESP
LSLESAMRLVELLGRIDPTDASLENLLVLVECLPERDEDYTPQSGKNGEPRWQQEASGRF
GFNIGRSLAHRAESDVAFYARCKRALIVSDWIAGEPTTDIEARYSSNAFSRVGHGDIRGY
ADGSRFLLDSALRISAIVLGRAEDQDAAALLMTRLDLGLPADALAISALAFPLTRGEILA
LYHAGHRNQDAIALLNPDQLTAIIGRRGDALHRTFQPIIAGAA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgcagccttcttcggaattgaccggcatcgcgacccatatgtgggagacctc
accggtgccgcgcgtgacgcaaccgcactttgggcgatcatgtcggattccatcgatggt
ctcgatgcgcaactcatcaccaacgaggatgccacgctggaggcaatgcgcgcagcgctt
gatgcaaccttagcatcagccgacgaaacggacgtcgtgatcctcggcttcgcaggtcac
gggacgcccgaccatcggcttgttctccacgatactgacgtagataatcttcctggcacg
acgttcggtatggacgaattggcgcaacgatttcgcgatactagggcgcgcgctgttatc
ctgttgcttgattgctgtttcagcggcggcgcgccagcccgtgtcctcgacgttggactc
gtgccaagaaatgcgatcgcctttcccttggttgatgttgccggacaaggccgcatcctt
ttcgcagcttcgtcggctcagcaggaggcgctcgaagatccgcaaacccggcacggtttg
ttcaccaaagccgtcattgacacactgctcgcggcggatgcaccgctcggcgttcttgag
ttggttgatcgcgtcactcgtctagtcggagccaatgccggacgctttggatacgagcaa
tcgcctaccatgttcggtcagacccaaggcgactttatgctaccgccgggccgtgtgggt
gaacgctatagagcagccttccctgagtacaatgctcttcagactaccggtgatatccgg
gaattgagccaagtaggcattccgcaagaagcaattgacgcttggcatgaacgtttcccc
gctggcttgaatgctttgcaaatcgccgcagtcaacgaaagaggcgtgctgggcggcaac
tcgctgatggttattgcgcctacaagcgcaggcaaaaccttcgtgggcgaactggccgcg
ttaaaggccatcgcagatggcagaaaagctgtcttcttattaccctataaagcgctcgtg
aatgagaagtttgaagatttttctgcactctatggagagcggcttggcctacggatcgcg
cgatgcagtggcgattggcaagatcaagtaggcgaagttctgcgtggtaaatacgacatc
gccttcttcacttacgagaaatttttgagcctttcggtttcttcgtcgcacattcttaat
cagattggccttgtagttcttgatgaggcgcagttcatcactgaacccggccgtggcatg
gtagtagagcttctacttaccagcttggttagcgcgcgccagcgtggcgtatgtccgcaa
ctcatcacattgagtgcggttattggccatgccaacagttttgatcgctggcttgattgc
gccctgcttcaaaccgacgagcgacctgttcccttggttgaaggagtgatggaccgcacc
ggagcattcaccaaaatggggccgaacggtgctgaaacgattcagatgatcgaacgccat
cgggttcagcaacgtaggacaaggccatcctcacaagacgtgattgttccgctcgtccag
caccttgtggaagcgggcgaaaaggtcattgtgttccgaaatgcgcgcggtcctgcaagc
ggctgcgccgaatatcttgccaacgaacttggcttggaacccgcgttggatgttctggac
gccttaccagaaggcgatccgtctgcaatgtcggacagcctacgccgcgcccttgcgggc
ggagtagccttccataacggcgacctgacacgtgacgaacgcgttgccgtcgagcgaggt
tttcgtagcctgaacggcaatatcaaggttcttgtcgcgaccagcactgttgcggctggc
gtcaacactccggcctcaacggtcatcatcgccgagacagatttcccaggccgcgaacgc
atcccctatacagtagcgcagtacaagaacatggctgggcgcgcgggccgactaggcttt
gaggctgaaggaaaatccatcctgctcgccgaaacgccgatggagcggaaccaacttttt
agaagatatgtccaaggccagccggaggcgattacgtcgtctttcaaccccaatcagcca
ggcacgtgggttattcgcctgcttgcacaagttcgtgacgttccgcgtgaagcggtcatt
gatcttatcgcaaacacttacggcggatatctggccgcaatccaaaatccagcttggcgc
gatcatatggctgactcgttggagcgacttctgaaccgcatgattgcggacgggctagtt
gacgaagaaggcgatagcctccggctcacaatgctcggacgggcctgcggtgaatcgcct
ctaagtctggaatctgcaatgcgtttagttgagctgctgggtcgcatcgacccgactgac
gcatcgctggaaaacctcttggtactggtcgagtgtctgccggagcgcgacgaagattat
acaccacagagcggcaagaatggtgagccgcgctggcaacaagaggctagtgggcggttc
ggcttcaacattgggcgctcattggcccatcgtgcagaaagcgatgtggcattctatgca
cgttgcaaacgcgcccttatcgtgagcgactggatagcaggcgaacccactaccgacatc
gaggcccgatattcgtcgaatgcgttctcgcgcgtggggcatggcgacatcagaggatat
gcggatggctcgcgttttctcttagattcggcattacgtatttctgccatcgtgcttggt
cgggccgaggatcaggatgcggcagccctactgatgaccaggcttgaccttgggcttccg
gctgacgcgcttgccatctctgcactcgcatttccgctgacacgtggcgaaattcttgcg
ctctatcatgctgggcatcgcaaccaagatgccatcgcattgctcaatcctgatcagtta
accgcgatcattggacggcgcggcgatgcgcttcatcgaacgttccaaccaattatagcg
ggcgcggcgtga
DBGET
integrated database retrieval system
