Sphingobium amiense: SAMIE_1024220
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Entry
SAMIE_1024220 CDS
T06684
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
sami
Sphingobium amiense
Pathway
sami02020
Two-component system
sami02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMIE_1024220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMIE_1024220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sami02022
]
SAMIE_1024220
02035 Bacterial motility proteins [BR:
sami02035
]
SAMIE_1024220
Two-component system [BR:
sami02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
SAMIE_1024220
Bacterial motility proteins [BR:
sami02035
]
Flagellar system
Flagellar assembly proteins
Others
SAMIE_1024220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_3
MCM
HTH_28
AAA
Mg_chelatase
AAA_19
UreE_N
MerR
HTH_1
AAA_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBD98921
UniProt:
A0A494W3Y0
LinkDB
All DBs
Position
complement(2820700..2821977)
Genome browser
AA seq
425 aa
AA seq
DB search
MSSLDVSRGVCALVPGLQHWLENAFYAVRVVDAASPRDRDSRRVLLATEIGHATHRDILI
TIVEGAPSLLAAANGLPARIAFGMADMGFAFALIAELARPANVPAVGDNGSARLMTMAGR
VARSDATVLIQGDTGTGKEGMARFLHAQSGRSTHDFIAVNCAALPETMMEAMLFGHKKGS
FTGAANASEGLFLAADGGTLFLDEIAELPLALQAKLLRALQEGEVLPVGATHPVPVNVRV
IAACNRNLAEEVAAGRFREDLYWRLNVMPLELRPLSQRRGDVSAITAAMLLRLSDMGKAD
LIWPTTDAIDKLSVHNWPGNARELGNVLQRAMVLRDGDRIEADDLHMGAAPQIAAAPAQP
IIAPAAFAPAEPVRLRDVARHSKLEAIRTALRETDGHRAAAARKLGISERTLRYRLAEMR
ELAAA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcttgacgtgagccgtggggtctgtgcgctcgttccgggcctgcagcactgg
ctcgaaaatgcgttctatgccgtgcgggtcgtcgatgccgccagccctcgtgacagggac
agccgccgcgtgctgctggcgacggaaatcggtcatgcgacccaccgggacatcctcatc
acgatcgttgaaggcgcgccgtcgctgctggccgctgcgaacggcctgcctgcgcggatc
gccttcggcatggcggacatgggcttcgccttcgccctcatcgccgaactcgctcgcccc
gccaatgtcccggcggtcggcgataacggtagcgcgcgcctgatgacgatggccggacgc
gtcgcccgcagcgacgccaccgtgctcatccagggcgataccggcaccggcaaggaaggc
atggcgcgcttccttcatgcccagtcgggccgctcgacccacgatttcatcgccgtcaat
tgcgccgcgcttcccgaaaccatgatggaagcgatgctgttcggtcacaagaaaggcagc
ttcaccggcgcggccaacgcttccgagggtctgttcctcgcggcggatggcggcaccttg
ttcctcgacgaaatcgccgaactcccgctggcgcttcaggcgaagctgctgcgtgccctg
caggaaggcgaagtgctgcccgtcggcgcgacccatccggtgccggtcaatgtccgcgtg
atcgcggcgtgcaaccgcaaccttgccgaggaagtcgccgcaggccgcttccgcgaagat
ctttactggcggctcaacgtcatgccgctcgaactgcgcccgctcagccaacggcgcggc
gacgtgagtgcgatcactgccgccatgctgttgcgcctgtccgacatgggcaaggccgac
ctcatctggccaacgaccgacgctatcgacaagctttcggtccataactggcccggcaac
gcccgcgaactgggcaacgtgctccagcgcgcgatggtcctgcgcgacggagaccggatc
gaagccgacgaccttcacatgggcgccgccccacagatcgccgccgcgcccgcgcagccg
atcatcgcccctgccgccttcgcgcccgcggagccggtgcgcctgcgcgatgtcgcccgc
cattccaagctggaggcgatccgcaccgcgctgcgcgagacggacggccaccgtgccgcc
gccgcgcggaagctcggcatttccgaacgcacgctgcgctaccggctcgccgaaatgcgc
gagctggcggcagcctga
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