Sphingobium amiense: SAMIE_1029730
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Entry
SAMIE_1029730 CDS
T06684
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sami
Sphingobium amiense
Pathway
sami03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SAMIE_1029730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1029730
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SAMIE_1029730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Sod_Fe_N
Motif
Other DBs
NCBI-ProteinID:
BBD99472
UniProt:
A0A494WF32
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All DBs
Position
3435419..3436300
Genome browser
AA seq
293 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYPATRSGAAISFHQIHEPTGKRIRYEKVAPGVGPVDRD
EILKGFEISKGNYVLLEDEEIEAVKIESRKTLDLVQFVDADAIDVLYYEKPYFVLPADDL
AEEAYAVLRDALRTTKKVGLGQLSVRGREQLVSLKPCGKGLILEVLRYADEVTRAQKYFG
SIPDRKADPDLLDLATAIIDKKTAPFHPEEFHDRYVDALQRLIEKKKKAKGKRIIEDVEE
PSAKGGNVIDLMAALKKSVGEGGRAAPAKKAPAKKASAKAASGSRAPAKRNIS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgcgcatattggcagggtcagatcagactggcgctggtctcgattcccgtg
gaaatctatcccgcgacccggtccggcgcggcgatttccttccaccagatccacgagccg
accggcaagcgcatccggtacgaaaaggtcgcgcccggcgtcggtccggtcgaccgcgac
gaaattctcaagggcttcgagatttcaaagggcaattacgtcctgctggaggacgaagag
atcgaggcggtgaaaatcgagagccgcaagacgctcgacctcgtccagttcgtcgacgcc
gacgccatcgacgtgctctattatgaaaagccctatttcgtcctccctgccgatgatctg
gccgaggaagcctatgccgtgctgcgcgatgcgctgcgcacgacgaaaaaggtgggcctt
ggccagctttcggtgcgggggcgggagcagctcgtgtcgctgaaaccctgcggcaagggg
ctgatcctcgaagtgctgcgctatgccgacgaagtcaccagggcgcagaaatatttcggg
tcgatccccgaccggaaggccgatcccgacctgctcgacctcgccaccgcgatcatcgac
aagaagaccgcgccttttcaccccgaagagtttcacgaccgctatgtcgacgcgctccag
cgcctgatcgaaaaaaagaagaaagcgaagggcaagcgcatcatcgaggatgtcgaggaa
ccgtcggcgaagggcggcaacgtcatcgacctgatggcggcgctcaagaaatcggtggga
gaggggggcagggccgcccccgccaagaaagcgcccgcgaagaaggcatccgccaaggcc
gcgtccggatcgcgcgctccggcaaagcgcaacatctcctga
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