Sphingobium amiense: SAMIE_1030680
Help
Entry
SAMIE_1030680 CDS
T06684
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sami
Sphingobium amiense
Pathway
sami03030
DNA replication
sami03430
Mismatch repair
sami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMIE_1030680
03430 Mismatch repair
SAMIE_1030680
03440 Homologous recombination
SAMIE_1030680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sami03032
]
SAMIE_1030680
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1030680
Enzymes [BR:
sami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMIE_1030680
DNA replication proteins [BR:
sami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMIE_1030680
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMIE_1030680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BBD99567
UniProt:
A0A494WAA0
LinkDB
All DBs
Position
complement(3566435..3567328)
Genome browser
AA seq
297 aa
AA seq
DB search
MTSSDHLETLAQALEATGDYRVIRRLKPRPRIVPPPGTPLRLGLVVDVETTGLDPQRDEI
IELAMTPFNYGLDGTIFSVGDSFQGLRQPSKPIAPEIIGITGITNEMVAGQIVDPAAVAS
FAAPASLVIAHNAAFDRRFLERFNDVFSTKPWACSLSQIDWAAEGFEGTKLAYLAQAAGF
FYDRHRAMHDCLATVELLAMWLPRSGATGLSRLLDGARTVSWRIWAENAPFDLKDVLKAR
GYRWNGDPGPQPRAWYIDVPEAQCEAELRFLRTEIYRYEVDPPVRRIDAYDRFSDRI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttctgaccatctggagaccctggcgcaggcgctggaggccacgggagactac
cgggtcatccggcgtctcaaaccgcgccctcgcatcgttcctccgccaggcacgccgctg
cgcctcggcctggtggtcgatgtggagaccacggggctcgaccctcagcgcgacgagatc
atcgaactcgccatgacaccattcaactacggcttggatggcaccattttcagcgtgggc
gacagcttccaagggctgcgtcagccgagcaagcctatcgccccggaaatcatcgggatc
acgggcatcaccaacgagatggtggccggccagattgttgatcccgcagcggtagcctca
ttcgcagcgccggcttcgctcgtcatcgcgcacaatgcggcgttcgaccgccgcttcctc
gaacgattcaacgacgtgttctcgacgaagccgtgggcatgctcgctcagccagatcgat
tgggcagcagaggggttcgagggcacgaaactcgcctatctcgctcaggccgccggcttc
ttctacgaccgccaccgcgcgatgcacgactgtcttgctacggtcgagttgttggcgatg
tggctgccccgatctggcgctacaggtctcagccgtctcctggacggcgctcgtaccgtt
tcttggcgaatctgggcggagaacgcgccctttgacctcaaggatgtccttaaagcgcgg
gggtaccgctggaacggcgatcccggcccgcagccgcgcgcctggtatattgacgttccc
gaggctcagtgcgaggccgaactacggttcttgagaacggaaatctatcggtatgaggtc
gatcccccggttcggcggatcgatgcttatgatcggttttcagacaggatctga
DBGET
integrated database retrieval system
