Sphingobium amiense: SAMIE_1033080
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Entry
SAMIE_1033080 CDS
T06684
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sami
Sphingobium amiense
Pathway
sami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMIE_1033080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1033080
Enzymes [BR:
sami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAMIE_1033080
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMIE_1033080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
BBD99807
UniProt:
A0A494WAU7
LinkDB
All DBs
Position
complement(3856939..3858345)
Genome browser
AA seq
468 aa
AA seq
DB search
MYRVALPAPDDFDGWRAAARRLATAGVEAADVTWSVGDAPGDLFGGDPLPPEPLRSAFSV
PRSFVELAEKAILHREDERFGLLYALLVRVRDRPGAMEDKADPLLRRVDGLAKAVRRDIH
KMRAFVRFREVEDGEESRFVAWFEPEHHIVRANAGFFVRRFATMRWSILTPEISIHWDGE
TLSQGPGATRADAPDGDAVEALWKGYYAAIFNPARLKTGAMLSEMPKKYWRNLPEAALIP
DLIAGAQAREAAMIATAPLPEKPQKRQGNAATVWAAIRDEAMACTRCPLYRDATQTVFGE
GPLDAALFFIGEQPGDQEDVAGRPFVGPAGQLFDAALAEAGVDRSRAYVTNAVKHFKFVR
QGKRRLHQSPDAGEIQACRWWLGQEIDLIRPRVIVALGASAARAMLGKAVTISRTRGSAI
GLESGAEGWVTVHPSYLLRLPDEAKRAEERARFVQELRMIGARVKALA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcgtcgccctgcccgcccctgacgatttcgacggctggcgggcagcggcgcgg
cggctggcgacggcaggggtggaagccgccgatgtgacatggagcgtcggggatgcgccg
ggcgacctgttcgggggcgatcctctgccgcccgagccgctgcgatccgctttctccgtg
ccgcgcagcttcgtggaactggccgaaaaggcgatattgcatcgcgaggatgagcggttc
ggtctgctttacgccctgctggtgcgggtacgggaccggccgggcgcgatggaggacaag
gcagatccgctgctgcgccgcgtcgatgggctggcgaaggctgtgcggcgcgacatccac
aagatgcgcgccttcgtgcggttccgcgaggtggaggacggcgaggagtcgcgcttcgtc
gcctggttcgagccggagcatcatatcgtccgcgccaatgcgggattcttcgtgcggcgg
ttcgcgacgatgcgctggtcgatcctgacgccggagatcagcatccactgggatggcgag
acgttgtcacaggggccgggcgccacccgcgccgatgcgccggatggcgacgcggtcgag
gctttgtggaaaggctattatgccgcgatcttcaacccggcccggctcaagactggcgcg
atgctgtccgaaatgcccaagaaatactggcgcaacctgcccgaagccgcgctcatcccc
gacctgatcgccggagcgcaggcgcgcgaggccgccatgatcgcgactgcgccgctgccc
gaaaagccgcagaagcggcagggcaacgccgcgaccgtctgggcggccatccgtgacgag
gcgatggcgtgcacgcgctgcccgctctaccgggatgcgacgcagaccgtgttcggcgaa
gggccgctcgacgcggccctgttcttcatcggcgagcagccgggcgatcaggaggacgtt
gccgggcgtcccttcgtcggtcccgccgggcagttgttcgacgcagcactggcggaggcg
ggcgtcgatcgctcgcgcgcctatgtcaccaacgcggtcaagcatttcaaattcgtgcgg
cagggcaagcggcggctgcaccagtcgccggatgctggcgagattcaggcgtgccgctgg
tggctggggcaggaaatcgacctgatccggccccgcgtcatcgtcgcgctgggcgcgtcg
gcggcgcgcgcgatgctgggcaaggcggtgacgatcagccggacgcgcggctccgccatc
gggctggagagcggagcggaagggtgggtgacggtgcacccgagctacctcctccgcctg
cccgacgaggccaagcgggccgaagagcgggcgcgcttcgtccaggaactgcggatgatc
ggggcgcgggtgaaggcgctcgcctga
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integrated database retrieval system
