Sphingobium amiense: SAMIE_1033350
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Entry
SAMIE_1033350 CDS
T06684
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
SAMIE_1033350
Enzymes [BR:
sami01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SAMIE_1033350
Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SAMIE_1033350
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
BBD99834
UniProt:
A0A494W5I2
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All DBs
Position
complement(3883528..3885618)
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AA seq
696 aa
AA seq
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MSSMRASSHVESYLIRMPIIALLLMTAGAGAQTETVQPVPPGYGSPGGATVQPLPAQDSG
PSPWQQAQSRVGMAQDAGIVGTINTWRALQQSDGLGFSTYSSFLIANPGWPGEDRMRQLA
ETGINPDSFDPAQVVAFFARYPARTATGHARNAVALMQMGRMGEARVAARSAWIGGSLSP
ADEARLLSLFGSGLTVADHEQRADALLWANDMAGAMRMIAYVSPARQPVFQARIAFRRKA
PEAAALMQAADAAGAVDAGYAADKALWLRDTGNWIGARQYLANRPAATYRPANAEKFYEV
LLGQARASANDAQWSFAYAIASRIDDAVPPGTDLSSQPIGVRDDYTSLAWLAGSTAFYNL
NRPADAVTMFRAYASAAKSPQTRSKGYYWAGRAALLAGDAASANSYFTQASVYPDQFYGQ
LALERLGRPIPPPSTVERAAPISAAERAAFEGRSVVRAARALGQMGYWEDQSKFARAIAN
NADSDADHSLAVELAESLGRPDMGVMVGRRAVSSGLTGYGTSAFPRVPVPSEAQYNWTMV
HAIARQESQFDKQIVSHAGARGLMQLMPGTAREQAGKLGMSYNPASLNEPGYNIMLGSAY
FQRMLDYYGGSYPLAVAAYNAGPGNVNKWIAANGDPRLAGADMLRWIENIPLFETRNYVQ
RVLENAVVYEAMNPERAKFRGTTAVLSRYLGKSTPG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgcgcgcctcatcccatgtcgaaagttacctcatccggatgccgattatc
gccctgttgctgatgaccgcaggcgctggcgcgcagaccgagacggtgcagccggttccg
cccggatatggctcccccggcggcgcgacggtccagccgcttccggcgcaggacagcggc
ccttccccctggcagcaggcgcagagccgcgtgggcatggcgcaggacgccgggatcgtc
ggcaccatcaacacatggcgcgcgctccagcagagcgatggcctgggcttttccacctat
tcgagcttcctgatcgccaatcccggctggccgggggaggaccggatgcggcagctggcc
gaaacggggatcaatcccgacagtttcgatccggcgcaggtcgtcgccttcttcgcccgc
tatcccgcgcgcacggcgacgggccatgcgcgcaacgccgtcgcgctgatgcagatgggg
cggatgggcgaggcgcgggtcgcggcgcgcagcgcgtggatcggcgggtcgctgtctccg
gcggacgaggcgcggctgctctcgctattcgggagcggccttacggtcgcggatcacgag
cagcgcgccgacgcgctgctgtgggccaatgacatggcgggcgcgatgcgcatgattgcc
tatgtcagccccgcgcggcagcccgtgtttcaggcgcggatcgccttccgccgcaaggcg
cccgaggccgcagcgctgatgcaggcggcggacgcggcgggcgcggtcgacgcaggctat
gccgccgacaaggcgctgtggctgcgcgataccggcaactggatcggggcgcggcaatat
ctcgccaaccgcccggcggcgacataccgccccgccaatgccgagaaattctacgaagtg
ctgctggggcaggcgcgggcgtcggccaacgatgcgcagtggagcttcgcctacgccatc
gccagccggatcgacgatgcggtgccgccgggcaccgacctgtccagccagcccatcggc
gtgcgcgacgattataccagccttgcctggctggcggggagcacggccttctacaatctc
aaccgccccgccgacgcggtgacgatgttccgcgcctacgccagtgcggccaagtcgccg
cagacgcggtccaagggctattattgggcggggcgcgccgctctgctggcgggcgatgcg
gcaagcgccaacagctatttcacgcaggcgagcgtctatcctgaccagttctacggccaa
ctggcgctcgaacggctgggccgcccgatcccgccgccctccaccgtcgagcgcgccgcg
cccatctccgccgccgagcgcgcggcgttcgagggccggtcggtcgtgcgcgcggcgcgg
gcgctggggcagatgggttactgggaggatcagagcaagttcgcccgcgccatcgccaac
aatgccgacagcgacgccgaccacagcctcgcggtcgaactggcggagagcctcggtcga
cccgacatgggcgtgatggtgggccgacgcgccgtatccagcggccttaccggctatggc
accagcgccttcccgcgcgtgcctgtgccgtccgaagcgcaatataactggaccatggtc
catgccatcgcgcgacaggaaagccagttcgacaagcagatcgtcagccatgccggcgcg
cgcggcctgatgcagttgatgcccggcaccgcgcgcgagcaggcggggaagctaggcatg
agctacaaccctgcgtcgctcaacgaaccgggctacaacatcatgctggggtccgcctat
ttccagcggatgctcgactattatggcggcagctacccgctggcggtggcggcctataat
gccggaccgggcaatgtgaacaagtggatcgccgccaatggcgacccgcgtctggcgggc
gcggacatgctgcgctggatcgagaatatcccgctcttcgagacgcgcaactatgtccag
cgggtgctggagaacgcggtcgtctatgaagcgatgaacccggagcgggcgaagttccgg
ggcacgactgccgtgctcagccgctatctgggcaaatcgactccggggtga
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