Sphingobium amiense: SAMIE_1034000
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Entry
SAMIE_1034000 CDS
T06684
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sami02000
]
SAMIE_1034000
Transporters [BR:
sami02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMIE_1034000
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BBD99899
UniProt:
A0A494WGJ7
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All DBs
Position
complement(3969537..3972443)
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AA seq
968 aa
AA seq
DB search
MTHRFRKNDAARGRVALAATASMMALAVSAPAFAQGAAPQGVAAADASDADIVVTGIRGS
LQRNLDIKRTSSGVVDVISSEDIGKFPDSNVAASLQRLPGVSIQRNGSRGEPQGISVRGF
GGDFNETLIDGRRISTASGGRSVDFTTVGADFVGQLAVYKTPELSLSSSSIGATLNISYP
KPFDKPGTRMAFSASGSVQDEAGKIVPTVGGLFSTTFADDTMGILVDAIYTRRDTQTNRV
FVSGWQGGRYAPCQIAGSTAATCSPTSDPSSAAWATPTNRQNVVGWYQQQYGADQRYTKD
ERIDGRIAFQWQPSDDVVLTIDDNYSRQKVTTDIDGFGIWFNQGDLRNVTLDGNGTTTNF
IQAGSPTDFVAGTDKNILETNQVGVNLKWDATENLTIDADASYSKSRLNPDGQVSSENAD
IGYGGLLGTALGVKVTGDSKNSFPELTTYGPAGDQSRWTDQAIIGSHVTVRQAQKNSDEI
KQFRLGATWKQDDLTIKVGGRYMEDEFNLQNRNTFANNYWQAYAGYGAPSGRTSGVPIPA
SLIQGTIGTKSWIPGFSGALPPVLLNYDARAYQQYLESLWVGPNTSGYNAGCCTGFNGTL
DLALDPGSVQKILEKSWSAWISVSFNTEIAGMPFKVNAGGREESTKIVSTGIGRLPVSIV
GSTADPTLLTVGFTPEQSVSTSSNYSYFLPAIDMKLELTDSFHLRFDASRTLTRPGLNTL
TPVLNVGSGQRVGALTATGGNPALKPYLAENFDFAAEWYYQRNSYASVNFFIKNVSNFIV
AGTERGTINGVIDPSTGQPAQFTISRRVNGPDATVRGVELAWQHVFGDSGFGFNANATFV
ETNKPYDRTDLSTSGFAVTGLANSANLVAFYDKNGFEFRTAVNWRDKYLLQFGQAQNNSA
FGAEPTFVNSALQIDLSTNIRLTDQFSVFGEALNITNETYSTHGRFSNQLLDVYGYGRRF
TAGVRYRF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgactcacagattccgtaaaaacgatgccgcgcgcggtcgcgtggcgctggccgcgacg
gccagcatgatggcgctggctgtctccgcaccagcctttgcgcaaggtgcagcgccgcag
ggcgtagccgccgccgacgcgagcgatgccgacatcgtcgtcaccggcatccgcggttcg
cttcagcgcaacctcgacatcaaacggacatcttcgggcgtcgtcgatgtgatttcgtcg
gaagacatcggcaaattcccggattcgaacgtagccgcctcgctccagcgcctgccgggc
gtctcgatccagcgcaacgggtcgcgtggtgaacctcagggcatctccgtccgcggtttc
ggtggcgacttcaacgaaacactgatcgacggccgtcgcatctcgaccgcttcgggcggc
cgctcggttgactttaccaccgtcggcgcggatttcgtcggtcagctcgccgtttacaag
acgccggagctctcgctgtccagcagctcaatcggtgccacgcttaatatctcctacccc
aagcccttcgacaagccgggcacccgcatggcgttcagcgcatcgggatcggttcaggac
gaagcgggcaagatcgtgccgaccgttggcgggctgttcagcaccacctttgccgacgac
acgatgggcatccttgttgacgccatctacacccgccgcgacacgcagaccaatcgcgtg
ttcgtttccggctggcagggcggccgctatgcgccgtgccagatcgcaggaagcacagcc
gccacctgttcgccgacctccgatccgagctctgcggcctgggcgacgccgacgaaccgc
cagaatgtcgtgggctggtatcagcagcaatatggcgcggaccagcgttacacgaaggac
gagcggatcgacggacgcatcgccttccagtggcagccttccgatgatgtggtgctgacg
attgacgacaattactcgcgtcagaaagtcacgaccgacattgacggcttcggcatctgg
ttcaatcagggcgacctgcgcaacgttacgctggacggcaacggaacgacgaccaacttc
atccaggccggttcgccgaccgacttcgttgcggggacggacaagaatatcctcgaaacc
aatcaggttggggtcaacctgaagtgggacgcgacggagaatctgaccatcgacgcagat
gccagctactccaaaagccggctcaatcccgacggccaggtcagcagcgagaacgccgac
atcggttatggcggactgctggggacggccctcggcgtcaaggtaaccggggacagcaag
aactccttccccgaactcacgacctacggacccgctggcgaccagtcccgctggacggat
caggcgatcatcggctcgcacgtcaccgtgcgtcaggctcagaagaacagcgacgaaatc
aagcagttccgtctgggtgccacttggaagcaggatgacctgacgatcaaggtcggcgga
cggtatatggaggatgaattcaatctccagaaccgcaacaccttcgccaataactactgg
caggcctatgcgggctacggcgcgccttcgggtcgcaccagcggcgtccccatcccggca
agcctgatccagggcactattggcacaaagagctggattcccggcttctcgggcgccttg
ccgccggtgctgctcaactatgacgcgcgcgcttaccagcaatatctggaaagcctgtgg
gtcggtccgaatacgtcgggatataatgccggttgctgcaccggcttcaacgggacgctg
gaccttgcgctcgatccgggcagcgtccagaaaattctggaaaagagctggtcggcatgg
atcagcgtcagcttcaacacggaaatcgctggcatgccgttcaaggtgaatgctggcggc
cgcgaagaaagcacgaagatcgtctcaaccggtatcggacgcctgccggtttcgatcgtg
ggcagcacggccgacccgacgcttctgaccgtgggcttcacgccggaacagtcggtttcg
accagcagcaactattcctacttcctgcctgccatcgacatgaagctggagttgaccgac
agcttccacctccgtttcgatgcatcgcgcacgctgacgaggccgggtctcaacacgctg
acaccggtgctcaacgtcggcagcggccagcgcgtcggcgcgctgacggccacgggcggc
aaccccgctctgaagccctatctcgcggagaatttcgacttcgcagcggaatggtattat
cagcgcaactcctatgcttcggtgaatttcttcatcaagaatgtgtcgaacttcatcgtg
gcgggcaccgaacggggcacgatcaacggggtgatcgacccgtcgaccggccagcctgct
cagttcaccatttcgcggcgcgtcaatggacctgacgccaccgtccgcggtgtggaactc
gcctggcagcatgtgtttggcgacagcggcttcggctttaatgccaacgccaccttcgtc
gaaaccaacaagccctatgaccggacggatctgtcgaccagcggctttgccgtgacgggt
ctcgccaactccgccaaccttgtcgccttctatgacaagaatggcttcgagttccggacg
gcggtcaactggcgcgacaaatatctgctccagttcggtcaggcgcagaacaattcggcc
ttcggtgcggaaccgaccttcgtcaattctgcgttgcagatcgacctcagcaccaacatc
cgtctgaccgaccagttcagcgtcttcggtgaagcgctcaacatcacgaacgagacatac
agcacccatggccggttctcgaaccagttgctggatgtctacggttatggccgccgcttc
actgcgggcgtccgttaccgcttctaa
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