Sphingobium amiense: SAMIE_1034100
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Entry
SAMIE_1034100 CDS
T06684
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sami
Sphingobium amiense
Pathway
sami00520
Amino sugar and nucleotide sugar metabolism
sami01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SAMIE_1034100
Enzymes [BR:
sami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
SAMIE_1034100
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF5005
Motif
Other DBs
NCBI-ProteinID:
BBD99909
UniProt:
A0A494WGK4
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Position
complement(3987947..3989599)
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AA seq
550 aa
AA seq
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MRYGTVLFTIALLSTSLSANAAPARFDDFRYQGQSIEKVTVKPGEYRNPILTGYYPDPSV
LRVGDDYYLVNSSFAHYPGLPIFRSKDLVNWTQIGNAIDRPEQLDFTGRRISQAVFAPAI
SYHDGTFYIVNTCVECKGNFIITAKNPAGPWSNPIWLPFEGIDPSIYWEGDKAYIVNNRA
PDEPPRYDGHRAIWIQEYDWRAGKMVGESTQLINGGVDISKKPVWIEGPHIFKKDGYYYL
TAAEGGTSVNHSQVVFRSKELRGPFIPYEGNPILTQRDLDPARPDFIGSAGHAQLVKTQK
GDWWATFLAVRPYDRDDHYNIGRETFLLPVTWKDGWPVILPRGQAIPHALKVPDLPAQPK
PPIPTSGDFSYVETFDGKALPMQWIGIRTPKTPFYSLKGGALELESGAPIGDLNGVPAFI
GRRQQHANATFSTTLRYTPEKNGDRAGLAAVQSDRSNLFFGLTRIAGKPVVALYTRDAAD
TDTLVASAHVATKGPIILTIRATGGTMAFDYATGGKTRTLKANLDATLLSTKKAGGFVGT
VVGPYHYTPS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacgggactgttcttttcaccattgcgctgctgtccacatcgctgtccgccaac
gccgcccccgcgcgcttcgacgatttccgctatcagggtcagtcgattgagaaagtgacg
gtaaagcccggcgaatatcgcaacccgatcctgacgggctattatcccgacccctccgtc
ctgcgcgtgggcgacgactattatctcgtcaattcctccttcgcccattatcccggcctg
ccgatcttcaggtccaaggatctggtcaactggacccagatcggcaacgccatcgaccgg
cccgaacagctcgatttcaccggccgccgcatctcgcaggcggtgttcgccccggcgatc
agctatcacgacggcaccttctacatcgtcaacacctgcgtggagtgtaagggcaacttc
atcatcacggcgaagaaccctgccggcccctggtccaaccccatctggcttcccttcgaa
gggatcgacccttccatctactgggaaggggacaaggcctatatcgtcaacaaccgcgcc
cccgacgaaccgccccgctatgacggccaccgcgccatctggattcaggaatatgactgg
cgcgcgggcaagatggtgggcgaaagcacccagctcatcaacggcggcgtcgacatcagc
aaaaagcccgtctggatcgaagggccgcatattttcaaaaaggacggttattattatctg
accgcggccgaaggcggcaccagcgtcaaccattcgcaggtcgtcttccgctcgaaggaa
ctgcgcggccccttcatcccttatgaaggcaaccccatcctcacccaacgcgatctcgac
cccgcgcggcccgacttcatcggatcggcgggccacgcccagttggttaaaacgcagaag
ggcgactggtgggcgaccttcctcgccgtccgcccctatgaccgcgacgaccattataat
atcggccgcgaaaccttcctgctgcccgtcacatggaaagacggctggcccgtcatcctg
ccgcgcgggcaggcgattccccatgcgctcaaggtgcccgacctccccgcccagccgaag
cctcccattcccactagcggcgacttctcctatgtcgagactttcgacggcaaggcgctg
ccgatgcaatggatcggcatccgcacgcccaaaacgcccttctacagcctgaagggcggc
gcgctggagctggagagcggcgcgcccatcggcgacctgaacggcgtcccggccttcatc
ggccgccgccagcagcacgccaacgccaccttctcgaccaccctgcgctacacgccggaa
aagaatggcgaccgcgccggcctcgccgccgtgcagagcgaccgcagcaacctcttcttc
ggcctcacccgcatcgccggaaagcccgtggtcgcgctctacacccgcgacgccgccgat
accgacacgctggtcgcatccgcccacgtcgcgaccaaaggcccgatcatcctcaccatc
cgcgcgactggcggcacgatggcgttcgactatgccacgggtggcaagacccgcacgctc
aaggccaatctcgacgctacgctgctcagcacgaaaaaagccggcggcttcgtcggcacc
gtcgtcggcccctatcactacacgccatcgtga
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