Sphingobium amiense: SAMIE_1034520
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Entry
SAMIE_1034520 CDS
T06684
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sami
Sphingobium amiense
Pathway
sami00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMIE_1034520
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sami01007
]
SAMIE_1034520
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sami03016
]
SAMIE_1034520
Enzymes [BR:
sami01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SAMIE_1034520
Amino acid related enzymes [BR:
sami01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SAMIE_1034520
Transfer RNA biogenesis [BR:
sami03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAMIE_1034520
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BBD99951
UniProt:
A0A494W6T0
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All DBs
Position
4034398..4035978
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AA seq
526 aa
AA seq
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MTISDMFRNAAFASKAWPYEEARKLLKRYADGAPEKGHILFETGYGPSGLPHIGTFNEVL
RTTMVRNAFHALSDVPTRLVAFSDDMDGLRKVPDNVPNQAMLTEHLGKPLTQVPDPFGKY
ESFAHHNNAMLREFLDRFGFDYEFVSATEQYRAGAFDEALRQVLRRYQAIMDIMLPTLRK
ERQATYSPVLPISPRSGVVLQVPVEVIDAEAGLVRFEDEGETVEQSILSGGAKLQWKVDW
AMRWYALGVDYEMAGKDLIDSVTQSSKICRALGGRPPEGFNYEMFLDEKGEKISKSKGNG
LSLEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRVNYPRQAVEQQLGNP
VHHVHDGKLPQGELPVTFGLLLNLVGVMGDASRDQVWGYLQNYVPGASAETYPELDALIG
HALAYHRDFVAPTLKRRAPDTNEAAALRRLDAELAALPEGASAEDIQNIVYAIGKDEAFG
FAELRDWFRALYQTLLGADQGPRMGSFIALYGIANSRRLIADALAS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgactatatccgacatgttccgcaatgccgctttcgcgtcaaaggcctggccctatgag
gaagcgcgcaagcttttgaagcgttatgccgatggcgcgccggaaaaagggcatatcctg
ttcgagaccggctatggcccctcgggcctgccgcatatcggcaccttcaacgaagtgctg
cgcacgacgatggtgcgcaatgcctttcacgcgctgtcggacgtgccgacgcggctggtg
gcgttcagcgacgatatggacggtttgcgcaaggtgccggacaatgtgcccaatcaggca
atgctgaccgagcatctgggcaagccgctgacgcaggtgcccgatccgttcggcaaatat
gagagtttcgcccatcacaacaatgcgatgctgcgcgaatttctcgaccggttcggcttc
gactacgagttcgtgtcagcgaccgaacagtatcgcgcgggtgcgttcgacgaggcgctg
cggcaggtgctgcggcgctatcaggcgatcatggacatcatgctgccgacgctgcgcaag
gaacggcaggcgacctattcgcccgtgctgccgatttcccccaggagcggcgtcgtgctt
caggtgccggtcgaggtgatcgacgccgaagcgggtctggtgcgcttcgaggatgaaggc
gagacggtcgagcagtcgatcctgtcgggcggcgccaagctgcagtggaaggtcgactgg
gcgatgcgctggtatgcgctgggcgtcgattacgagatggcgggcaaggatctgatcgat
tcggtcacgcagtcgtccaagatctgccgcgcgctgggtggccgcccgcccgagggcttc
aactacgagatgttcctcgacgaaaagggcgagaaaatctccaagtccaagggcaacggc
ctcagcctcgaacaatggctgacctatgggccgcaggaaagcctcgccttctacgcctat
cgcgagccgaagaaggcgaagcagctccacatgggcgtcattccgcgcgcggtggacgaa
tattggcagttccgcgtcaattaccccaggcaggcggtcgagcagcaactgggcaacccc
gtccaccacgtccatgacggcaagctgccgcagggcgaactgccagtgacgttcgggctg
ctgctcaacctcgtcggcgtgatgggcgacgcgagccgggatcaggtgtggggctatctc
cagaactatgtgccgggcgcgagcgcggagacctatcccgaactcgacgcgctgatcggc
catgcgcttgcctatcaccgcgatttcgtggccccgacgctcaagcgccgcgcgcccgat
acgaatgaggcggcggcattgcgcaggctggacgcggaactggcggcgctgcctgaaggc
gcgtcggcggaggacatccagaatatcgtctatgccatcggcaaggacgaggcgttcggt
ttcgcggagctgcgcgactggttcagggcgctctaccagacactgctgggcgcggatcag
gggccgcgcatgggcagcttcatcgcgctttatggtatcgcaaacagccgcaggctgatc
gccgacgcgctggcgtcctga
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